Strain Fitness in Xanthobacter sp. DMC5 around GFF4407

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF4406 and GFF4407 are separated by 27 nucleotidesGFF4407 and GFF4408 are separated by 48 nucleotides GFF4406 - Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, at 210,652 to 211,878 GFF4406 GFF4407 - hypothetical protein, at 211,906 to 212,232 GFF4407 GFF4408 - 2-oxoglutarate dehydrogenase E1 component, at 212,281 to 215,235 GFF4408 Position (kb) 211 212 213Strain fitness (log2 ratio) -1 0 1at 212.269 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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212,269 - +1.1

Or see this region's nucleotide sequence