Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4404 and GFF4405 are separated by 18 nucleotides GFF4405 and GFF4406 are separated by 124 nucleotides
GFF4404 - Dihydrolipoyl dehydrogenase 3, at 208,041 to 209,444
GFF4404
GFF4405 - hypothetical protein, at 209,463 to 210,527
GFF4405
GFF4406 - Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, at 210,652 to 211,878
GFF4406
Position (kb) 209
210
211 Strain fitness (log2 ratio) -1
0
1
2 at 209.438 kb on - strand at 209.465 kb on - strand at 209.465 kb on - strand at 209.465 kb on - strand at 209.574 kb on - strand, within GFF4405 at 209.574 kb on - strand, within GFF4405 at 209.652 kb on - strand, within GFF4405 at 209.710 kb on + strand, within GFF4405 at 209.711 kb on - strand, within GFF4405 at 209.711 kb on - strand, within GFF4405 at 209.711 kb on - strand, within GFF4405 at 209.711 kb on - strand, within GFF4405 at 209.799 kb on - strand, within GFF4405 at 209.855 kb on - strand, within GFF4405 at 209.983 kb on + strand, within GFF4405 at 209.984 kb on - strand, within GFF4405 at 209.984 kb on - strand, within GFF4405 at 209.984 kb on - strand, within GFF4405 at 209.984 kb on - strand, within GFF4405 at 209.984 kb on - strand, within GFF4405 at 210.034 kb on + strand, within GFF4405 at 210.035 kb on - strand, within GFF4405 at 210.128 kb on - strand, within GFF4405 at 210.257 kb on - strand, within GFF4405 at 210.360 kb on - strand, within GFF4405 at 210.425 kb on - strand at 210.561 kb on - strand at 210.648 kb on + strand at 210.648 kb on + strand at 210.649 kb on - strand at 210.649 kb on - strand at 210.649 kb on - strand at 210.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 209,438 - +0.6 209,465 - +0.1 209,465 - +2.0 209,465 - +0.1 209,574 - GFF4405 0.10 +0.4 209,574 - GFF4405 0.10 +0.2 209,652 - GFF4405 0.18 +0.0 209,710 + GFF4405 0.23 +0.4 209,711 - GFF4405 0.23 -1.6 209,711 - GFF4405 0.23 -0.4 209,711 - GFF4405 0.23 +0.4 209,711 - GFF4405 0.23 +0.0 209,799 - GFF4405 0.32 -0.6 209,855 - GFF4405 0.37 +1.6 209,983 + GFF4405 0.49 +0.8 209,984 - GFF4405 0.49 +0.1 209,984 - GFF4405 0.49 -0.4 209,984 - GFF4405 0.49 +0.6 209,984 - GFF4405 0.49 +0.0 209,984 - GFF4405 0.49 +0.4 210,034 + GFF4405 0.54 +0.1 210,035 - GFF4405 0.54 +0.5 210,128 - GFF4405 0.62 -1.7 210,257 - GFF4405 0.75 -0.0 210,360 - GFF4405 0.84 -1.7 210,425 - +0.2 210,561 - +0.3 210,648 + -1.2 210,648 + -0.4 210,649 - +0.0 210,649 - -1.2 210,649 - +0.8 210,649 - -0.6
Or see this region's nucleotide sequence