Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4364 and GFF4365 are separated by 102 nucleotides GFF4365 and GFF4366 are separated by 63 nucleotides GFF4366 and GFF4367 are separated by 45 nucleotides
GFF4364 - hypothetical protein, at 152,091 to 153,185
GFF4364
GFF4365 - hypothetical protein, at 153,288 to 153,839
GFF4365
GFF4366 - hypothetical protein, at 153,903 to 154,889
GFF4366
GFF4367 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 154,935 to 156,251
GFF4367
Position (kb) 153
154
155 Strain fitness (log2 ratio) -2
-1
0
1 at 153.234 kb on + strand at 153.235 kb on - strand at 153.431 kb on - strand, within GFF4365 at 153.535 kb on + strand, within GFF4365 at 153.535 kb on + strand, within GFF4365 at 153.694 kb on + strand, within GFF4365 at 153.694 kb on + strand, within GFF4365 at 154.057 kb on + strand, within GFF4366 at 154.057 kb on + strand, within GFF4366 at 154.057 kb on + strand, within GFF4366 at 154.057 kb on + strand, within GFF4366 at 154.058 kb on - strand, within GFF4366 at 154.210 kb on + strand, within GFF4366 at 154.211 kb on - strand, within GFF4366 at 154.211 kb on - strand, within GFF4366 at 154.216 kb on + strand, within GFF4366 at 154.375 kb on + strand, within GFF4366 at 154.375 kb on + strand, within GFF4366 at 154.376 kb on - strand, within GFF4366 at 154.376 kb on - strand, within GFF4366 at 154.376 kb on - strand, within GFF4366 at 154.462 kb on + strand, within GFF4366 at 154.462 kb on + strand, within GFF4366 at 154.462 kb on + strand, within GFF4366 at 154.463 kb on - strand, within GFF4366 at 154.463 kb on - strand, within GFF4366 at 154.543 kb on + strand, within GFF4366 at 155.057 kb on + strand at 155.143 kb on + strand, within GFF4367 at 155.144 kb on - strand, within GFF4367 at 155.251 kb on - strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.255 kb on - strand, within GFF4367 at 155.255 kb on - strand, within GFF4367 at 155.665 kb on + strand, within GFF4367 at 155.675 kb on - strand, within GFF4367 at 155.675 kb on - strand, within GFF4367 at 155.752 kb on + strand, within GFF4367 at 155.752 kb on + strand, within GFF4367 at 155.753 kb on - strand, within GFF4367
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 153,234 + -1.7 153,235 - +0.5 153,431 - GFF4365 0.26 -0.5 153,535 + GFF4365 0.45 -0.6 153,535 + GFF4365 0.45 +0.0 153,694 + GFF4365 0.74 -0.4 153,694 + GFF4365 0.74 -0.5 154,057 + GFF4366 0.16 -0.2 154,057 + GFF4366 0.16 +0.1 154,057 + GFF4366 0.16 -0.0 154,057 + GFF4366 0.16 +0.4 154,058 - GFF4366 0.16 +1.3 154,210 + GFF4366 0.31 +0.1 154,211 - GFF4366 0.31 -1.0 154,211 - GFF4366 0.31 -0.7 154,216 + GFF4366 0.32 -0.4 154,375 + GFF4366 0.48 +0.6 154,375 + GFF4366 0.48 -0.4 154,376 - GFF4366 0.48 -1.5 154,376 - GFF4366 0.48 -0.0 154,376 - GFF4366 0.48 -0.7 154,462 + GFF4366 0.57 +0.2 154,462 + GFF4366 0.57 +0.1 154,462 + GFF4366 0.57 -0.4 154,463 - GFF4366 0.57 +0.2 154,463 - GFF4366 0.57 +0.4 154,543 + GFF4366 0.65 +0.0 155,057 + +0.0 155,143 + GFF4367 0.16 -2.1 155,144 - GFF4367 0.16 -0.2 155,251 - GFF4367 0.24 -0.6 155,254 + GFF4367 0.24 -0.1 155,254 + GFF4367 0.24 -0.7 155,254 + GFF4367 0.24 -0.3 155,254 + GFF4367 0.24 -0.6 155,254 + GFF4367 0.24 -1.6 155,255 - GFF4367 0.24 -0.8 155,255 - GFF4367 0.24 +0.4 155,665 + GFF4367 0.55 +0.7 155,675 - GFF4367 0.56 +1.0 155,675 - GFF4367 0.56 +0.4 155,752 + GFF4367 0.62 +0.1 155,752 + GFF4367 0.62 -0.9 155,753 - GFF4367 0.62 +1.1
Or see this region's nucleotide sequence