Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4361 and GFF4362 overlap by 1 nucleotides GFF4362 and GFF4363 are separated by 321 nucleotides
GFF4361 - Sulfate adenylyltransferase subunit 2, at 147,291 to 148,190
GFF4361
GFF4362 - Bifunctional enzyme CysN/CysC, at 148,190 to 150,100
GFF4362
GFF4363 - putative ABC transporter ATP-binding protein YheS, at 150,422 to 152,044
GFF4363
Position (kb) 148
149
150
151 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 147.204 kb on - strand at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.499 kb on - strand, within GFF4361 at 147.789 kb on + strand, within GFF4361 at 147.790 kb on - strand, within GFF4361 at 147.790 kb on - strand, within GFF4361 at 147.790 kb on - strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.903 kb on + strand, within GFF4361 at 147.904 kb on - strand, within GFF4361 at 148.032 kb on + strand, within GFF4361 at 148.033 kb on - strand, within GFF4361 at 148.182 kb on + strand at 148.183 kb on - strand at 148.214 kb on + strand at 148.214 kb on + strand at 148.215 kb on - strand at 148.215 kb on - strand at 148.253 kb on + strand at 148.254 kb on - strand at 148.254 kb on - strand at 148.496 kb on + strand, within GFF4362 at 148.497 kb on - strand, within GFF4362 at 148.497 kb on - strand, within GFF4362 at 148.559 kb on + strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.658 kb on + strand, within GFF4362 at 148.659 kb on - strand, within GFF4362 at 149.318 kb on + strand, within GFF4362 at 149.319 kb on - strand, within GFF4362 at 149.319 kb on - strand, within GFF4362 at 149.951 kb on + strand at 149.951 kb on + strand at 149.952 kb on - strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.240 kb on - strand at 150.356 kb on + strand at 150.356 kb on + strand at 150.357 kb on - strand at 150.623 kb on + strand, within GFF4363 at 150.785 kb on + strand, within GFF4363 at 150.785 kb on + strand, within GFF4363 at 150.875 kb on + strand, within GFF4363
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 147,204 - -2.2 147,498 + GFF4361 0.23 -2.8 147,498 + GFF4361 0.23 -2.6 147,498 + GFF4361 0.23 -4.1 147,498 + GFF4361 0.23 -2.0 147,498 + GFF4361 0.23 -1.3 147,499 - GFF4361 0.23 -3.5 147,789 + GFF4361 0.55 -2.7 147,790 - GFF4361 0.55 -2.2 147,790 - GFF4361 0.55 -1.7 147,790 - GFF4361 0.55 -0.7 147,867 + GFF4361 0.64 -2.2 147,867 + GFF4361 0.64 -2.9 147,867 + GFF4361 0.64 -1.3 147,867 + GFF4361 0.64 -0.5 147,867 + GFF4361 0.64 -1.3 147,867 + GFF4361 0.64 -1.4 147,868 - GFF4361 0.64 -1.7 147,868 - GFF4361 0.64 -3.8 147,868 - GFF4361 0.64 -1.0 147,868 - GFF4361 0.64 -2.4 147,903 + GFF4361 0.68 -1.4 147,904 - GFF4361 0.68 -3.1 148,032 + GFF4361 0.82 -3.0 148,033 - GFF4361 0.82 -2.2 148,182 + -1.3 148,183 - -0.9 148,214 + -2.9 148,214 + -2.6 148,215 - -0.9 148,215 - +0.8 148,253 + -2.0 148,254 - -3.6 148,254 - -2.7 148,496 + GFF4362 0.16 -3.7 148,497 - GFF4362 0.16 -2.1 148,497 - GFF4362 0.16 -1.9 148,559 + GFF4362 0.19 -1.8 148,560 - GFF4362 0.19 -2.5 148,560 - GFF4362 0.19 -3.4 148,560 - GFF4362 0.19 -2.6 148,560 - GFF4362 0.19 -1.5 148,658 + GFF4362 0.24 -0.9 148,659 - GFF4362 0.25 -0.4 149,318 + GFF4362 0.59 -1.2 149,319 - GFF4362 0.59 -2.5 149,319 - GFF4362 0.59 -2.0 149,951 + -1.8 149,951 + -1.7 149,952 - -2.0 150,239 + +1.4 150,239 + -0.8 150,239 + -1.7 150,239 + -0.5 150,240 - +1.1 150,356 + -0.2 150,356 + -0.6 150,357 - -0.1 150,623 + GFF4363 0.12 -1.8 150,785 + GFF4363 0.22 +0.8 150,785 + GFF4363 0.22 -0.6 150,875 + GFF4363 0.28 +0.5
Or see this region's nucleotide sequence