Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4320 and GFF4321 are separated by 110 nucleotides GFF4321 and GFF4322 are separated by 85 nucleotides GFF4322 and GFF4323 are separated by 102 nucleotides
GFF4320 - 2-hydroxychromene-2-carboxylate isomerase, at 99,996 to 100,610
GFF4320
GFF4321 - hypothetical protein, at 100,721 to 101,470
GFF4321
GFF4322 - Argininosuccinate synthase, at 101,556 to 102,785
GFF4322
GFF4323 - hypothetical protein, at 102,888 to 104,999
GFF4323
Position (kb) 101
102
103 Strain fitness (log2 ratio) -2
-1
0
1 at 100.558 kb on + strand at 100.565 kb on - strand at 100.582 kb on + strand at 100.585 kb on + strand at 100.585 kb on + strand at 100.627 kb on + strand at 100.628 kb on - strand at 100.628 kb on - strand at 101.083 kb on + strand, within GFF4321 at 101.515 kb on + strand at 101.517 kb on + strand at 102.783 kb on + strand at 102.795 kb on - strand at 102.807 kb on + strand at 102.807 kb on + strand at 102.807 kb on + strand at 102.808 kb on - strand at 102.808 kb on - strand at 103.035 kb on + strand at 103.035 kb on + strand at 103.038 kb on + strand at 103.197 kb on + strand, within GFF4323 at 103.197 kb on + strand, within GFF4323 at 103.197 kb on + strand, within GFF4323 at 103.198 kb on - strand, within GFF4323 at 103.198 kb on - strand, within GFF4323 at 103.198 kb on - strand, within GFF4323 at 103.198 kb on - strand, within GFF4323 at 103.198 kb on - strand, within GFF4323 at 103.198 kb on - strand, within GFF4323 at 103.203 kb on + strand, within GFF4323 at 103.204 kb on - strand, within GFF4323 at 103.204 kb on - strand, within GFF4323 at 103.499 kb on + strand, within GFF4323 at 103.499 kb on + strand, within GFF4323 at 103.500 kb on - strand, within GFF4323
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 100,558 + -1.0 100,565 - -0.1 100,582 + +1.1 100,585 + +0.3 100,585 + +1.4 100,627 + -0.8 100,628 - +0.5 100,628 - +0.1 101,083 + GFF4321 0.48 +1.4 101,515 + -0.9 101,517 + +0.8 102,783 + -0.6 102,795 - +0.1 102,807 + +1.2 102,807 + -0.2 102,807 + -0.0 102,808 - -0.7 102,808 - -0.2 103,035 + +1.1 103,035 + +0.6 103,038 + -1.4 103,197 + GFF4323 0.15 +0.4 103,197 + GFF4323 0.15 -0.7 103,197 + GFF4323 0.15 +0.6 103,198 - GFF4323 0.15 +1.0 103,198 - GFF4323 0.15 -0.2 103,198 - GFF4323 0.15 -0.1 103,198 - GFF4323 0.15 +0.4 103,198 - GFF4323 0.15 -0.7 103,198 - GFF4323 0.15 +0.6 103,203 + GFF4323 0.15 -2.3 103,204 - GFF4323 0.15 +1.5 103,204 - GFF4323 0.15 -0.7 103,499 + GFF4323 0.29 +0.7 103,499 + GFF4323 0.29 -0.6 103,500 - GFF4323 0.29 +0.3
Or see this region's nucleotide sequence