Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4314 and GFF4315 are separated by 277 nucleotides GFF4315 and GFF4316 are separated by 24 nucleotides GFF4316 and GFF4317 are separated by 83 nucleotides
GFF4314 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, at 94,240 to 94,800
GFF4314
GFF4315 - Large-conductance mechanosensitive channel, at 95,078 to 95,548
GFF4315
GFF4316 - Proline iminopeptidase, at 95,573 to 96,601
GFF4316
GFF4317 - Dihydroorotate dehydrogenase (quinone), at 96,685 to 97,755
GFF4317
Position (kb) 95
96
97 Strain fitness (log2 ratio) -1
0
1 at 94.893 kb on - strand at 94.898 kb on - strand at 95.014 kb on + strand at 95.072 kb on + strand at 95.171 kb on - strand, within GFF4315 at 95.171 kb on - strand, within GFF4315 at 95.247 kb on - strand, within GFF4315 at 95.321 kb on + strand, within GFF4315 at 95.352 kb on + strand, within GFF4315 at 95.835 kb on + strand, within GFF4316 at 95.836 kb on - strand, within GFF4316 at 95.836 kb on - strand, within GFF4316 at 95.889 kb on + strand, within GFF4316 at 95.928 kb on + strand, within GFF4316 at 95.929 kb on - strand, within GFF4316 at 96.328 kb on - strand, within GFF4316 at 96.456 kb on + strand, within GFF4316 at 96.456 kb on + strand, within GFF4316 at 96.457 kb on - strand, within GFF4316 at 96.457 kb on - strand, within GFF4316 at 96.457 kb on - strand, within GFF4316 at 96.610 kb on - strand at 96.610 kb on - strand at 96.672 kb on + strand at 96.673 kb on - strand at 96.673 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 94,893 - +0.1 94,898 - -1.5 95,014 + -0.9 95,072 + -1.5 95,171 - GFF4315 0.20 +1.0 95,171 - GFF4315 0.20 +0.7 95,247 - GFF4315 0.36 -0.4 95,321 + GFF4315 0.52 -0.8 95,352 + GFF4315 0.58 +0.4 95,835 + GFF4316 0.25 -0.2 95,836 - GFF4316 0.26 +0.3 95,836 - GFF4316 0.26 -1.5 95,889 + GFF4316 0.31 -0.4 95,928 + GFF4316 0.34 +1.4 95,929 - GFF4316 0.35 +0.4 96,328 - GFF4316 0.73 -0.2 96,456 + GFF4316 0.86 -0.9 96,456 + GFF4316 0.86 +0.4 96,457 - GFF4316 0.86 +0.3 96,457 - GFF4316 0.86 +0.7 96,457 - GFF4316 0.86 +0.8 96,610 - -0.0 96,610 - +0.1 96,672 + -0.5 96,673 - +0.1 96,673 - -1.5
Or see this region's nucleotide sequence