Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4294 and GFF4295 are separated by 88 nucleotides GFF4295 and GFF4296 are separated by 10 nucleotides
GFF4294 - hypothetical protein, at 74,513 to 75,925
GFF4294
GFF4295 - Bicarbonate transport ATP-binding protein CmpD, at 76,014 to 76,838
GFF4295
GFF4296 - Riboflavin transport system permease protein RibX, at 76,849 to 77,658
GFF4296
Position (kb) 76
77 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 75.093 kb on + strand, within GFF4294 at 75.094 kb on - strand, within GFF4294 at 75.171 kb on + strand, within GFF4294 at 75.172 kb on - strand, within GFF4294 at 75.202 kb on - strand, within GFF4294 at 75.657 kb on + strand, within GFF4294 at 76.119 kb on + strand, within GFF4295 at 76.120 kb on - strand, within GFF4295 at 76.120 kb on - strand, within GFF4295 at 76.120 kb on - strand, within GFF4295 at 76.126 kb on + strand, within GFF4295 at 76.126 kb on + strand, within GFF4295 at 76.127 kb on - strand, within GFF4295 at 76.237 kb on + strand, within GFF4295 at 76.238 kb on - strand, within GFF4295 at 76.390 kb on + strand, within GFF4295 at 76.390 kb on + strand, within GFF4295 at 76.745 kb on - strand, within GFF4295 at 76.745 kb on - strand, within GFF4295 at 77.038 kb on + strand, within GFF4296 at 77.038 kb on + strand, within GFF4296 at 77.357 kb on + strand, within GFF4296 at 77.357 kb on + strand, within GFF4296 at 77.357 kb on + strand, within GFF4296 at 77.358 kb on - strand, within GFF4296 at 77.358 kb on - strand, within GFF4296 at 77.528 kb on + strand, within GFF4296 at 77.529 kb on - strand, within GFF4296 at 77.529 kb on - strand, within GFF4296
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 75,093 + GFF4294 0.41 +1.0 75,094 - GFF4294 0.41 +1.3 75,171 + GFF4294 0.47 +0.7 75,172 - GFF4294 0.47 -3.0 75,202 - GFF4294 0.49 -0.5 75,657 + GFF4294 0.81 +1.4 76,119 + GFF4295 0.13 +0.1 76,120 - GFF4295 0.13 +0.4 76,120 - GFF4295 0.13 +0.6 76,120 - GFF4295 0.13 -0.1 76,126 + GFF4295 0.14 -1.3 76,126 + GFF4295 0.14 +1.0 76,127 - GFF4295 0.14 +0.4 76,237 + GFF4295 0.27 +0.1 76,238 - GFF4295 0.27 -1.3 76,390 + GFF4295 0.46 -0.1 76,390 + GFF4295 0.46 -0.0 76,745 - GFF4295 0.89 +0.5 76,745 - GFF4295 0.89 -0.2 77,038 + GFF4296 0.23 +0.4 77,038 + GFF4296 0.23 -0.6 77,357 + GFF4296 0.63 -0.2 77,357 + GFF4296 0.63 -0.2 77,357 + GFF4296 0.63 -0.9 77,358 - GFF4296 0.63 -0.4 77,358 - GFF4296 0.63 -1.3 77,528 + GFF4296 0.84 +0.5 77,529 - GFF4296 0.84 -0.4 77,529 - GFF4296 0.84 -0.6
Or see this region's nucleotide sequence