Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4285 and GFF4286 are separated by 279 nucleotides GFF4286 and GFF4287 are separated by 3 nucleotides GFF4287 and GFF4288 are separated by 78 nucleotides
GFF4285 - Glutathione-specific gamma-glutamylcyclotransferase, at 64,614 to 65,303
GFF4285
GFF4286 - Phytochrome-like protein cph1, at 65,583 to 67,742
GFF4286
GFF4287 - hypothetical protein, at 67,746 to 68,522
GFF4287
GFF4288 - hypothetical protein, at 68,601 to 69,497
GFF4288
Position (kb) 65
66
67
68 Strain fitness (log2 ratio) -2
-1
0
1
2 at 64.726 kb on + strand, within GFF4285 at 64.804 kb on + strand, within GFF4285 at 64.804 kb on + strand, within GFF4285 at 64.805 kb on - strand, within GFF4285 at 64.894 kb on + strand, within GFF4285 at 64.895 kb on - strand, within GFF4285 at 64.895 kb on - strand, within GFF4285 at 65.137 kb on + strand, within GFF4285 at 65.314 kb on - strand at 65.318 kb on - strand at 65.397 kb on + strand at 65.397 kb on + strand at 66.085 kb on - strand, within GFF4286 at 66.085 kb on - strand, within GFF4286 at 66.204 kb on + strand, within GFF4286 at 66.205 kb on - strand, within GFF4286 at 66.205 kb on - strand, within GFF4286 at 66.243 kb on + strand, within GFF4286 at 66.243 kb on + strand, within GFF4286 at 66.339 kb on + strand, within GFF4286 at 66.339 kb on + strand, within GFF4286 at 66.340 kb on - strand, within GFF4286 at 66.340 kb on - strand, within GFF4286 at 66.574 kb on - strand, within GFF4286 at 67.317 kb on + strand, within GFF4286 at 67.356 kb on + strand, within GFF4286 at 67.510 kb on - strand, within GFF4286 at 67.515 kb on + strand, within GFF4286 at 67.812 kb on - strand at 68.053 kb on + strand, within GFF4287 at 68.054 kb on - strand, within GFF4287 at 68.054 kb on - strand, within GFF4287
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 64,726 + GFF4285 0.16 -0.6 64,804 + GFF4285 0.28 +1.1 64,804 + GFF4285 0.28 -1.5 64,805 - GFF4285 0.28 -1.1 64,894 + GFF4285 0.41 -0.4 64,895 - GFF4285 0.41 +0.7 64,895 - GFF4285 0.41 -0.6 65,137 + GFF4285 0.76 -0.2 65,314 - +0.6 65,318 - +0.6 65,397 + +2.2 65,397 + +0.3 66,085 - GFF4286 0.23 +0.6 66,085 - GFF4286 0.23 +0.0 66,204 + GFF4286 0.29 +1.2 66,205 - GFF4286 0.29 +0.1 66,205 - GFF4286 0.29 +0.3 66,243 + GFF4286 0.31 -0.9 66,243 + GFF4286 0.31 -2.3 66,339 + GFF4286 0.35 +0.7 66,339 + GFF4286 0.35 +1.3 66,340 - GFF4286 0.35 -0.1 66,340 - GFF4286 0.35 -0.3 66,574 - GFF4286 0.46 -0.4 67,317 + GFF4286 0.80 +1.3 67,356 + GFF4286 0.82 -0.7 67,510 - GFF4286 0.89 -0.5 67,515 + GFF4286 0.89 -1.8 67,812 - +0.8 68,053 + GFF4287 0.40 +0.4 68,054 - GFF4287 0.40 +0.2 68,054 - GFF4287 0.40 +0.3
Or see this region's nucleotide sequence