Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4284 and GFF4285 are separated by 57 nucleotides GFF4285 and GFF4286 are separated by 279 nucleotides
GFF4284 - HTH-type transcriptional activator RhaS, at 63,777 to 64,556
GFF4284
GFF4285 - Glutathione-specific gamma-glutamylcyclotransferase, at 64,614 to 65,303
GFF4285
GFF4286 - Phytochrome-like protein cph1, at 65,583 to 67,742
GFF4286
Position (kb) 64
65
66 Strain fitness (log2 ratio) -2
-1
0
1
2 at 63.755 kb on + strand at 63.755 kb on + strand at 63.799 kb on + strand at 63.799 kb on + strand at 63.799 kb on + strand at 63.901 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.234 kb on - strand, within GFF4284 at 64.260 kb on + strand, within GFF4284 at 64.461 kb on + strand, within GFF4284 at 64.726 kb on + strand, within GFF4285 at 64.804 kb on + strand, within GFF4285 at 64.804 kb on + strand, within GFF4285 at 64.805 kb on - strand, within GFF4285 at 64.894 kb on + strand, within GFF4285 at 64.895 kb on - strand, within GFF4285 at 64.895 kb on - strand, within GFF4285 at 65.137 kb on + strand, within GFF4285 at 65.314 kb on - strand at 65.318 kb on - strand at 65.397 kb on + strand at 65.397 kb on + strand at 66.085 kb on - strand, within GFF4286 at 66.085 kb on - strand, within GFF4286 at 66.204 kb on + strand, within GFF4286 at 66.205 kb on - strand, within GFF4286 at 66.205 kb on - strand, within GFF4286 at 66.243 kb on + strand, within GFF4286 at 66.243 kb on + strand, within GFF4286
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 63,755 + -1.3 63,755 + +0.4 63,799 + +0.3 63,799 + +1.4 63,799 + -0.5 63,901 + GFF4284 0.16 +0.4 64,065 + GFF4284 0.37 +0.6 64,065 + GFF4284 0.37 -1.7 64,065 + GFF4284 0.37 -0.8 64,065 + GFF4284 0.37 -0.2 64,066 - GFF4284 0.37 +0.3 64,066 - GFF4284 0.37 -0.9 64,066 - GFF4284 0.37 -0.9 64,066 - GFF4284 0.37 +1.7 64,234 - GFF4284 0.59 +0.0 64,260 + GFF4284 0.62 +0.5 64,461 + GFF4284 0.88 -1.6 64,726 + GFF4285 0.16 -0.6 64,804 + GFF4285 0.28 +1.1 64,804 + GFF4285 0.28 -1.5 64,805 - GFF4285 0.28 -1.1 64,894 + GFF4285 0.41 -0.4 64,895 - GFF4285 0.41 +0.7 64,895 - GFF4285 0.41 -0.6 65,137 + GFF4285 0.76 -0.2 65,314 - +0.6 65,318 - +0.6 65,397 + +2.2 65,397 + +0.3 66,085 - GFF4286 0.23 +0.6 66,085 - GFF4286 0.23 +0.0 66,204 + GFF4286 0.29 +1.2 66,205 - GFF4286 0.29 +0.1 66,205 - GFF4286 0.29 +0.3 66,243 + GFF4286 0.31 -0.9 66,243 + GFF4286 0.31 -2.3
Or see this region's nucleotide sequence