Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4278 and GFF4279 are separated by 10 nucleotides GFF4279 and GFF4280 are separated by 55 nucleotides GFF4280 and GFF4281 are separated by 10 nucleotides
GFF4278 - hypothetical protein, at 48,264 to 50,978
GFF4278
GFF4279 - hypothetical protein, at 50,989 to 52,080
GFF4279
GFF4280 - hypothetical protein, at 52,136 to 52,921
GFF4280
GFF4281 - Adenosine deaminase, at 52,932 to 54,479
GFF4281
Position (kb) 50
51
52
53 Strain fitness (log2 ratio) -1
0
1 at 50.016 kb on - strand, within GFF4278 at 50.109 kb on + strand, within GFF4278 at 50.109 kb on + strand, within GFF4278 at 50.110 kb on - strand, within GFF4278 at 50.110 kb on - strand, within GFF4278 at 50.241 kb on + strand, within GFF4278 at 50.241 kb on + strand, within GFF4278 at 51.218 kb on + strand, within GFF4279 at 51.218 kb on + strand, within GFF4279 at 51.219 kb on - strand, within GFF4279 at 51.750 kb on - strand, within GFF4279 at 51.750 kb on - strand, within GFF4279 at 52.023 kb on - strand at 52.023 kb on - strand at 52.131 kb on - strand at 52.177 kb on - strand at 52.177 kb on - strand at 52.255 kb on + strand, within GFF4280 at 52.255 kb on + strand, within GFF4280 at 52.257 kb on + strand, within GFF4280 at 52.258 kb on - strand, within GFF4280 at 52.258 kb on - strand, within GFF4280 at 52.258 kb on - strand, within GFF4280 at 52.512 kb on - strand, within GFF4280 at 52.512 kb on - strand, within GFF4280 at 52.538 kb on + strand, within GFF4280 at 52.706 kb on + strand, within GFF4280 at 52.706 kb on + strand, within GFF4280 at 52.837 kb on + strand, within GFF4280 at 52.838 kb on - strand, within GFF4280 at 52.868 kb on + strand at 52.868 kb on + strand at 52.869 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 50,016 - GFF4278 0.65 +0.1 50,109 + GFF4278 0.68 -1.6 50,109 + GFF4278 0.68 +0.7 50,110 - GFF4278 0.68 +0.5 50,110 - GFF4278 0.68 -0.0 50,241 + GFF4278 0.73 -0.0 50,241 + GFF4278 0.73 -0.1 51,218 + GFF4279 0.21 -1.2 51,218 + GFF4279 0.21 -0.3 51,219 - GFF4279 0.21 -0.1 51,750 - GFF4279 0.70 +0.2 51,750 - GFF4279 0.70 -0.4 52,023 - +0.2 52,023 - +0.1 52,131 - +0.4 52,177 - -1.2 52,177 - +0.1 52,255 + GFF4280 0.15 -1.1 52,255 + GFF4280 0.15 +0.5 52,257 + GFF4280 0.15 +1.3 52,258 - GFF4280 0.16 -1.2 52,258 - GFF4280 0.16 -0.0 52,258 - GFF4280 0.16 -0.2 52,512 - GFF4280 0.48 +0.0 52,512 - GFF4280 0.48 -0.1 52,538 + GFF4280 0.51 -0.6 52,706 + GFF4280 0.73 +1.2 52,706 + GFF4280 0.73 +0.1 52,837 + GFF4280 0.89 +0.4 52,838 - GFF4280 0.89 -0.3 52,868 + +1.0 52,868 + +0.1 52,869 - +0.6
Or see this region's nucleotide sequence