Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4275 and GFF4276 are separated by 203 nucleotides GFF4276 and GFF4277 are separated by 139 nucleotides GFF4277 and GFF4278 are separated by 72 nucleotides
GFF4275 - H(+)/Cl(-) exchange transporter ClcA, at 44,862 to 46,226
GFF4275
GFF4276 - Peptide deformylase, at 46,430 to 46,939
GFF4276
GFF4277 - hypothetical protein, at 47,079 to 48,191
GFF4277
GFF4278 - hypothetical protein, at 48,264 to 50,978
GFF4278
Position (kb) 47
48
49 Strain fitness (log2 ratio) -2
-1
0
1
2 at 46.116 kb on + strand at 46.117 kb on - strand at 46.224 kb on + strand at 46.224 kb on + strand at 46.225 kb on - strand at 46.643 kb on + strand, within GFF4276 at 46.643 kb on + strand, within GFF4276 at 46.643 kb on + strand, within GFF4276 at 46.643 kb on + strand, within GFF4276 at 46.644 kb on - strand, within GFF4276 at 46.644 kb on - strand, within GFF4276 at 46.644 kb on - strand, within GFF4276 at 46.648 kb on - strand, within GFF4276 at 47.020 kb on + strand at 47.021 kb on - strand at 47.261 kb on - strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.787 kb on + strand, within GFF4277 at 47.787 kb on + strand, within GFF4277 at 48.081 kb on - strand at 48.081 kb on - strand at 48.151 kb on - strand at 48.732 kb on + strand, within GFF4278 at 48.732 kb on + strand, within GFF4278 at 48.733 kb on - strand, within GFF4278
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 46,116 + -0.9 46,117 - +0.1 46,224 + +0.6 46,224 + -0.7 46,225 - -0.4 46,643 + GFF4276 0.42 +0.4 46,643 + GFF4276 0.42 +0.4 46,643 + GFF4276 0.42 -0.1 46,643 + GFF4276 0.42 +1.3 46,644 - GFF4276 0.42 -0.2 46,644 - GFF4276 0.42 -0.7 46,644 - GFF4276 0.42 -0.7 46,648 - GFF4276 0.43 -2.7 47,020 + -0.7 47,021 - +0.3 47,261 - GFF4277 0.16 -0.7 47,577 + GFF4277 0.45 +0.9 47,577 + GFF4277 0.45 -0.1 47,577 + GFF4277 0.45 +1.8 47,577 + GFF4277 0.45 -0.4 47,578 - GFF4277 0.45 +0.1 47,578 - GFF4277 0.45 +0.2 47,578 - GFF4277 0.45 +0.7 47,578 - GFF4277 0.45 +0.6 47,578 - GFF4277 0.45 -0.2 47,787 + GFF4277 0.64 -1.1 47,787 + GFF4277 0.64 -1.2 48,081 - -0.9 48,081 - -0.7 48,151 - +0.7 48,732 + GFF4278 0.17 -0.3 48,732 + GFF4278 0.17 +0.0 48,733 - GFF4278 0.17 +0.8
Or see this region's nucleotide sequence