Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4247 and GFF4248 overlap by 4 nucleotides GFF4248 and GFF4249 are separated by 474 nucleotides
GFF4247 - hypothetical protein, at 17,822 to 18,748
GFF4247
GFF4248 - hypothetical protein, at 18,745 to 19,560
GFF4248
GFF4249 - putative enoyl-CoA hydratase echA6, at 20,035 to 20,817
GFF4249
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1 at 17.752 kb on - strand at 17.786 kb on + strand at 17.787 kb on - strand at 17.806 kb on + strand at 17.807 kb on - strand at 17.807 kb on - strand at 17.807 kb on - strand at 17.999 kb on + strand, within GFF4247 at 18.000 kb on - strand, within GFF4247 at 18.000 kb on - strand, within GFF4247 at 18.000 kb on - strand, within GFF4247 at 18.035 kb on + strand, within GFF4247 at 18.035 kb on + strand, within GFF4247 at 18.051 kb on + strand, within GFF4247 at 18.052 kb on - strand, within GFF4247 at 18.052 kb on - strand, within GFF4247 at 18.105 kb on + strand, within GFF4247 at 18.105 kb on + strand, within GFF4247 at 18.105 kb on + strand, within GFF4247 at 18.105 kb on + strand, within GFF4247 at 18.106 kb on - strand, within GFF4247 at 18.173 kb on + strand, within GFF4247 at 18.173 kb on + strand, within GFF4247 at 18.174 kb on - strand, within GFF4247 at 18.174 kb on - strand, within GFF4247 at 18.335 kb on + strand, within GFF4247 at 18.335 kb on + strand, within GFF4247 at 18.336 kb on - strand, within GFF4247 at 18.336 kb on - strand, within GFF4247 at 18.336 kb on - strand, within GFF4247 at 18.336 kb on - strand, within GFF4247 at 18.369 kb on - strand, within GFF4247 at 18.564 kb on + strand, within GFF4247 at 18.564 kb on + strand, within GFF4247 at 18.564 kb on + strand, within GFF4247 at 18.565 kb on - strand, within GFF4247 at 19.487 kb on + strand at 19.487 kb on + strand at 19.523 kb on + strand at 19.524 kb on - strand at 19.541 kb on + strand at 19.542 kb on - strand at 19.542 kb on - strand at 19.630 kb on + strand at 19.631 kb on - strand at 19.631 kb on - strand at 19.952 kb on + strand at 19.952 kb on + strand at 19.953 kb on - strand at 20.281 kb on + strand, within GFF4249 at 20.281 kb on + strand, within GFF4249 at 20.281 kb on + strand, within GFF4249 at 20.282 kb on - strand, within GFF4249 at 20.282 kb on - strand, within GFF4249 at 20.404 kb on - strand, within GFF4249 at 20.458 kb on + strand, within GFF4249 at 20.557 kb on + strand, within GFF4249 at 20.557 kb on + strand, within GFF4249 at 20.558 kb on - strand, within GFF4249 at 20.558 kb on - strand, within GFF4249 at 20.558 kb on - strand, within GFF4249
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 17,752 - -0.4 17,786 + -0.4 17,787 - +1.0 17,806 + -0.6 17,807 - +0.7 17,807 - -0.8 17,807 - -0.1 17,999 + GFF4247 0.19 +0.0 18,000 - GFF4247 0.19 +0.4 18,000 - GFF4247 0.19 +0.2 18,000 - GFF4247 0.19 +0.9 18,035 + GFF4247 0.23 -1.7 18,035 + GFF4247 0.23 -1.5 18,051 + GFF4247 0.25 -1.1 18,052 - GFF4247 0.25 +1.4 18,052 - GFF4247 0.25 +0.1 18,105 + GFF4247 0.31 -0.5 18,105 + GFF4247 0.31 -0.3 18,105 + GFF4247 0.31 -0.2 18,105 + GFF4247 0.31 -0.5 18,106 - GFF4247 0.31 +1.5 18,173 + GFF4247 0.38 +0.4 18,173 + GFF4247 0.38 -1.2 18,174 - GFF4247 0.38 -1.7 18,174 - GFF4247 0.38 +0.4 18,335 + GFF4247 0.55 -0.4 18,335 + GFF4247 0.55 -0.6 18,336 - GFF4247 0.55 +0.2 18,336 - GFF4247 0.55 +0.5 18,336 - GFF4247 0.55 -1.3 18,336 - GFF4247 0.55 +1.5 18,369 - GFF4247 0.59 +0.3 18,564 + GFF4247 0.80 -1.5 18,564 + GFF4247 0.80 -0.1 18,564 + GFF4247 0.80 -1.3 18,565 - GFF4247 0.80 -0.4 19,487 + -1.0 19,487 + -1.6 19,523 + -1.5 19,524 - +1.0 19,541 + -1.6 19,542 - +1.4 19,542 - +0.6 19,630 + +1.0 19,631 - -0.6 19,631 - +0.1 19,952 + -0.5 19,952 + +0.5 19,953 - +0.2 20,281 + GFF4249 0.31 +1.0 20,281 + GFF4249 0.31 +0.2 20,281 + GFF4249 0.31 +0.6 20,282 - GFF4249 0.32 -0.7 20,282 - GFF4249 0.32 +0.2 20,404 - GFF4249 0.47 +0.4 20,458 + GFF4249 0.54 +1.1 20,557 + GFF4249 0.67 -1.1 20,557 + GFF4249 0.67 -2.0 20,558 - GFF4249 0.67 +0.2 20,558 - GFF4249 0.67 -0.6 20,558 - GFF4249 0.67 +0.5
Or see this region's nucleotide sequence