Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4241 and GFF4242 are separated by 222 nucleotides GFF4242 and GFF4243 overlap by 4 nucleotides GFF4243 and GFF4244 are separated by 64 nucleotides GFF4244 and GFF4245 are separated by 93 nucleotides
GFF4241 - Peptide methionine sulfoxide reductase MsrA, at 13,618 to 14,274
GFF4241
GFF4242 - Dihydropteroate synthase, at 14,497 to 15,261
GFF4242
GFF4243 - Bifunctional folate synthesis protein, at 15,258 to 15,755
GFF4243
GFF4244 - hypothetical protein, at 15,820 to 16,026
GFF4244
GFF4245 - putative GTPase, at 16,120 to 17,106
GFF4245
Position (kb) 14
15
16 Strain fitness (log2 ratio) -1
0
1 at 13.516 kb on + strand at 13.520 kb on + strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.564 kb on + strand at 13.564 kb on + strand at 13.565 kb on - strand at 13.708 kb on + strand, within GFF4241 at 13.708 kb on + strand, within GFF4241 at 13.709 kb on - strand, within GFF4241 at 13.841 kb on - strand, within GFF4241 at 13.870 kb on + strand, within GFF4241 at 13.870 kb on + strand, within GFF4241 at 13.871 kb on - strand, within GFF4241 at 13.871 kb on - strand, within GFF4241 at 13.871 kb on - strand, within GFF4241 at 13.871 kb on - strand, within GFF4241 at 13.946 kb on - strand, within GFF4241 at 14.041 kb on + strand, within GFF4241 at 14.041 kb on + strand, within GFF4241 at 14.042 kb on - strand, within GFF4241 at 14.093 kb on - strand, within GFF4241 at 14.093 kb on - strand, within GFF4241 at 14.162 kb on - strand, within GFF4241 at 14.174 kb on + strand, within GFF4241 at 14.272 kb on + strand at 14.273 kb on - strand at 15.270 kb on + strand at 15.849 kb on + strand, within GFF4244 at 15.955 kb on - strand, within GFF4244 at 16.041 kb on + strand at 16.041 kb on + strand at 16.043 kb on + strand at 16.043 kb on + strand at 16.044 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 13,516 + +0.0 13,520 + +0.3 13,521 - +0.6 13,521 - +0.5 13,521 - +0.2 13,564 + -1.2 13,564 + +1.4 13,565 - +0.9 13,708 + GFF4241 0.14 +0.2 13,708 + GFF4241 0.14 -0.7 13,709 - GFF4241 0.14 -1.1 13,841 - GFF4241 0.34 +0.3 13,870 + GFF4241 0.38 +0.5 13,870 + GFF4241 0.38 +0.7 13,871 - GFF4241 0.39 +0.1 13,871 - GFF4241 0.39 +0.2 13,871 - GFF4241 0.39 +0.6 13,871 - GFF4241 0.39 -0.2 13,946 - GFF4241 0.50 +1.2 14,041 + GFF4241 0.64 +1.6 14,041 + GFF4241 0.64 +0.2 14,042 - GFF4241 0.65 +0.1 14,093 - GFF4241 0.72 +1.4 14,093 - GFF4241 0.72 +0.8 14,162 - GFF4241 0.83 -0.6 14,174 + GFF4241 0.85 -0.4 14,272 + -0.6 14,273 - +1.2 15,270 + -1.2 15,849 + GFF4244 0.14 +1.6 15,955 - GFF4244 0.65 -0.0 16,041 + +1.0 16,041 + +0.1 16,043 + +0.5 16,043 + +0.5 16,044 - +0.8
Or see this region's nucleotide sequence