Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4231 and GFF4232 are separated by 21 nucleotides GFF4232 and GFF4233 overlap by 1 nucleotides GFF4233 and GFF4234 are separated by 68 nucleotides
GFF4231 - Putative aliphatic sulfonates-binding protein, at 3,991 to 4,950
GFF4231
GFF4232 - Putative aliphatic sulfonates transport permease protein SsuC, at 4,972 to 5,853
GFF4232
GFF4233 - Aliphatic sulfonates import ATP-binding protein SsuB, at 5,853 to 6,668
GFF4233
GFF4234 - hypothetical protein, at 6,737 to 7,606
GFF4234
Position (kb) 4
5
6 Strain fitness (log2 ratio) -1
0
1
2 at 3.980 kb on - strand at 4.178 kb on - strand, within GFF4231 at 4.309 kb on + strand, within GFF4231 at 4.309 kb on + strand, within GFF4231 at 4.309 kb on + strand, within GFF4231 at 4.309 kb on + strand, within GFF4231 at 4.309 kb on + strand, within GFF4231 at 4.318 kb on + strand, within GFF4231 at 4.319 kb on - strand, within GFF4231 at 4.435 kb on + strand, within GFF4231 at 4.435 kb on + strand, within GFF4231 at 4.435 kb on + strand, within GFF4231 at 4.436 kb on - strand, within GFF4231 at 4.436 kb on - strand, within GFF4231 at 4.436 kb on - strand, within GFF4231 at 4.436 kb on - strand, within GFF4231 at 4.637 kb on - strand, within GFF4231 at 4.637 kb on - strand, within GFF4231 at 4.645 kb on + strand, within GFF4231 at 4.646 kb on - strand, within GFF4231 at 4.646 kb on - strand, within GFF4231 at 4.646 kb on - strand, within GFF4231 at 4.822 kb on + strand, within GFF4231 at 4.823 kb on - strand, within GFF4231 at 5.441 kb on + strand, within GFF4232 at 5.441 kb on + strand, within GFF4232 at 5.442 kb on - strand, within GFF4232 at 5.476 kb on + strand, within GFF4232 at 5.476 kb on + strand, within GFF4232 at 5.476 kb on + strand, within GFF4232 at 5.477 kb on - strand, within GFF4232 at 5.477 kb on - strand, within GFF4232 at 5.540 kb on - strand, within GFF4232 at 5.540 kb on - strand, within GFF4232 at 5.647 kb on - strand, within GFF4232 at 5.686 kb on + strand, within GFF4232 at 5.687 kb on - strand, within GFF4232 at 5.687 kb on - strand, within GFF4232 at 5.749 kb on + strand, within GFF4232 at 5.825 kb on - strand at 5.924 kb on + strand at 6.491 kb on + strand, within GFF4233 at 6.492 kb on - strand, within GFF4233 at 6.510 kb on + strand, within GFF4233
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 3,980 - -0.7 4,178 - GFF4231 0.19 +0.9 4,309 + GFF4231 0.33 -0.1 4,309 + GFF4231 0.33 -0.1 4,309 + GFF4231 0.33 -0.0 4,309 + GFF4231 0.33 +0.6 4,309 + GFF4231 0.33 +0.1 4,318 + GFF4231 0.34 +0.1 4,319 - GFF4231 0.34 -0.7 4,435 + GFF4231 0.46 +1.1 4,435 + GFF4231 0.46 -0.3 4,435 + GFF4231 0.46 +2.4 4,436 - GFF4231 0.46 -0.6 4,436 - GFF4231 0.46 -0.1 4,436 - GFF4231 0.46 -0.8 4,436 - GFF4231 0.46 +0.4 4,637 - GFF4231 0.67 -0.6 4,637 - GFF4231 0.67 +0.5 4,645 + GFF4231 0.68 -0.2 4,646 - GFF4231 0.68 +1.2 4,646 - GFF4231 0.68 -0.9 4,646 - GFF4231 0.68 +0.4 4,822 + GFF4231 0.87 +0.2 4,823 - GFF4231 0.87 -0.7 5,441 + GFF4232 0.53 -1.4 5,441 + GFF4232 0.53 +0.1 5,442 - GFF4232 0.53 -0.1 5,476 + GFF4232 0.57 +0.8 5,476 + GFF4232 0.57 -0.9 5,476 + GFF4232 0.57 +0.1 5,477 - GFF4232 0.57 +0.2 5,477 - GFF4232 0.57 +0.1 5,540 - GFF4232 0.64 -0.2 5,540 - GFF4232 0.64 +0.2 5,647 - GFF4232 0.77 -0.4 5,686 + GFF4232 0.81 -0.0 5,687 - GFF4232 0.81 +0.8 5,687 - GFF4232 0.81 -0.4 5,749 + GFF4232 0.88 -1.0 5,825 - -0.5 5,924 + +0.6 6,491 + GFF4233 0.78 +0.0 6,492 - GFF4233 0.78 +0.1 6,510 + GFF4233 0.81 -0.1
Or see this region's nucleotide sequence