Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4208 and GFF4209 are separated by 222 nucleotides GFF4209 and GFF4210 are separated by 4 nucleotides
GFF4208 - hypothetical protein, at 233,684 to 235,975
GFF4208
GFF4209 - Efflux pump periplasmic linker BepF, at 236,198 to 237,325
GFF4209
GFF4210 - Efflux pump membrane transporter BepG, at 237,330 to 240,491
GFF4210
Position (kb) 236
237
238 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 236.084 kb on + strand at 236.084 kb on + strand at 236.084 kb on + strand at 236.084 kb on + strand at 236.085 kb on - strand at 236.085 kb on - strand at 236.085 kb on - strand at 236.477 kb on + strand, within GFF4209 at 236.477 kb on + strand, within GFF4209 at 236.831 kb on + strand, within GFF4209 at 236.831 kb on + strand, within GFF4209 at 236.831 kb on + strand, within GFF4209 at 236.831 kb on + strand, within GFF4209 at 236.831 kb on + strand, within GFF4209 at 236.832 kb on - strand, within GFF4209 at 236.832 kb on - strand, within GFF4209 at 236.832 kb on - strand, within GFF4209 at 236.832 kb on - strand, within GFF4209 at 236.861 kb on + strand, within GFF4209 at 236.941 kb on - strand, within GFF4209 at 236.942 kb on + strand, within GFF4209 at 236.942 kb on + strand, within GFF4209 at 236.942 kb on + strand, within GFF4209 at 236.943 kb on - strand, within GFF4209 at 237.143 kb on + strand, within GFF4209 at 237.435 kb on + strand at 237.477 kb on + strand at 237.561 kb on + strand at 237.561 kb on + strand at 237.561 kb on + strand at 237.561 kb on + strand at 237.562 kb on - strand at 237.594 kb on + strand at 237.595 kb on - strand at 237.759 kb on + strand, within GFF4210 at 237.789 kb on + strand, within GFF4210 at 237.789 kb on + strand, within GFF4210 at 237.789 kb on + strand, within GFF4210 at 237.790 kb on - strand, within GFF4210 at 237.801 kb on + strand, within GFF4210 at 237.879 kb on + strand, within GFF4210 at 237.880 kb on - strand, within GFF4210 at 237.880 kb on - strand, within GFF4210 at 238.209 kb on + strand, within GFF4210 at 238.209 kb on + strand, within GFF4210 at 238.210 kb on - strand, within GFF4210 at 238.314 kb on + strand, within GFF4210 at 238.314 kb on + strand, within GFF4210 at 238.314 kb on + strand, within GFF4210 at 238.315 kb on - strand, within GFF4210
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 236,084 + +0.5 236,084 + -0.6 236,084 + +1.1 236,084 + -0.2 236,085 - +1.3 236,085 - +0.9 236,085 - -1.7 236,477 + GFF4209 0.25 +0.2 236,477 + GFF4209 0.25 -0.3 236,831 + GFF4209 0.56 +1.4 236,831 + GFF4209 0.56 -0.3 236,831 + GFF4209 0.56 +0.4 236,831 + GFF4209 0.56 +0.6 236,831 + GFF4209 0.56 -0.4 236,832 - GFF4209 0.56 -0.7 236,832 - GFF4209 0.56 -1.1 236,832 - GFF4209 0.56 -1.0 236,832 - GFF4209 0.56 +0.9 236,861 + GFF4209 0.59 +0.1 236,941 - GFF4209 0.66 -1.8 236,942 + GFF4209 0.66 -0.5 236,942 + GFF4209 0.66 -0.1 236,942 + GFF4209 0.66 -0.2 236,943 - GFF4209 0.66 +0.7 237,143 + GFF4209 0.84 -0.3 237,435 + -1.1 237,477 + -0.3 237,561 + +0.2 237,561 + -0.5 237,561 + -0.6 237,561 + -0.2 237,562 - -1.0 237,594 + +0.4 237,595 - -1.2 237,759 + GFF4210 0.14 +0.3 237,789 + GFF4210 0.15 -0.3 237,789 + GFF4210 0.15 +0.8 237,789 + GFF4210 0.15 +0.4 237,790 - GFF4210 0.15 +0.7 237,801 + GFF4210 0.15 -0.8 237,879 + GFF4210 0.17 -1.0 237,880 - GFF4210 0.17 -0.3 237,880 - GFF4210 0.17 +1.1 238,209 + GFF4210 0.28 -0.2 238,209 + GFF4210 0.28 -0.8 238,210 - GFF4210 0.28 +0.4 238,314 + GFF4210 0.31 +3.5 238,314 + GFF4210 0.31 -0.4 238,314 + GFF4210 0.31 +0.2 238,315 - GFF4210 0.31 -0.0
Or see this region's nucleotide sequence