Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF419 and GFF420 are separated by 91 nucleotides GFF420 and GFF421 are separated by 726 nucleotides
GFF419 - Deoxyribodipyrimidine photo-lyase, at 430,185 to 431,660
GFF419
GFF420 - Inner membrane metabolite transport protein YhjE, at 431,752 to 433,098
GFF420
GFF421 - hypothetical protein, at 433,825 to 437,553
GFF421
Position (kb) 431
432
433
434 Strain fitness (log2 ratio) -2
-1
0
1 at 430.799 kb on - strand, within GFF419 at 430.816 kb on + strand, within GFF419 at 430.982 kb on - strand, within GFF419 at 431.554 kb on + strand at 431.555 kb on - strand at 431.831 kb on + strand at 431.831 kb on + strand at 431.831 kb on + strand at 431.831 kb on + strand at 431.832 kb on - strand at 431.832 kb on - strand at 431.927 kb on + strand, within GFF420 at 431.927 kb on + strand, within GFF420 at 431.927 kb on + strand, within GFF420 at 431.948 kb on + strand, within GFF420 at 431.948 kb on + strand, within GFF420 at 432.082 kb on + strand, within GFF420 at 432.082 kb on + strand, within GFF420 at 432.082 kb on + strand, within GFF420 at 432.082 kb on + strand, within GFF420 at 432.083 kb on - strand, within GFF420 at 432.083 kb on - strand, within GFF420 at 432.083 kb on - strand, within GFF420 at 432.227 kb on + strand, within GFF420 at 432.269 kb on + strand, within GFF420 at 432.297 kb on - strand, within GFF420 at 432.308 kb on + strand, within GFF420 at 432.309 kb on - strand, within GFF420 at 432.309 kb on - strand, within GFF420 at 432.309 kb on - strand, within GFF420 at 432.323 kb on + strand, within GFF420 at 432.323 kb on + strand, within GFF420 at 432.324 kb on - strand, within GFF420 at 432.626 kb on + strand, within GFF420 at 432.990 kb on - strand at 432.995 kb on + strand at 432.995 kb on + strand at 432.995 kb on + strand at 432.995 kb on + strand at 432.995 kb on + strand at 432.995 kb on + strand at 432.995 kb on + strand at 432.996 kb on - strand at 433.104 kb on + strand at 433.105 kb on - strand at 433.125 kb on - strand at 433.352 kb on - strand at 433.386 kb on + strand at 433.397 kb on + strand at 433.523 kb on - strand at 433.555 kb on - strand at 433.558 kb on + strand at 433.559 kb on - strand at 433.581 kb on + strand at 433.673 kb on + strand at 433.673 kb on + strand at 433.703 kb on + strand at 433.710 kb on + strand at 433.734 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 430,799 - GFF419 0.42 +0.1 430,816 + GFF419 0.43 -0.0 430,982 - GFF419 0.54 -0.4 431,554 + -1.1 431,555 - +0.6 431,831 + -0.3 431,831 + +0.2 431,831 + +0.1 431,831 + -1.6 431,832 - +0.7 431,832 - +0.4 431,927 + GFF420 0.13 -0.1 431,927 + GFF420 0.13 -0.1 431,927 + GFF420 0.13 -0.1 431,948 + GFF420 0.15 -0.1 431,948 + GFF420 0.15 -0.4 432,082 + GFF420 0.24 +0.0 432,082 + GFF420 0.24 -0.7 432,082 + GFF420 0.24 -0.1 432,082 + GFF420 0.24 +1.0 432,083 - GFF420 0.25 -0.4 432,083 - GFF420 0.25 +0.8 432,083 - GFF420 0.25 -1.0 432,227 + GFF420 0.35 -0.1 432,269 + GFF420 0.38 -1.8 432,297 - GFF420 0.40 -0.7 432,308 + GFF420 0.41 -0.4 432,309 - GFF420 0.41 +0.3 432,309 - GFF420 0.41 +0.8 432,309 - GFF420 0.41 -0.2 432,323 + GFF420 0.42 -0.7 432,323 + GFF420 0.42 -0.1 432,324 - GFF420 0.42 +0.2 432,626 + GFF420 0.65 -0.5 432,990 - +0.5 432,995 + +0.4 432,995 + -0.6 432,995 + -0.8 432,995 + +0.6 432,995 + +0.1 432,995 + -0.1 432,995 + +0.1 432,996 - +0.1 433,104 + -2.2 433,105 - -1.0 433,125 - +0.2 433,352 - +0.6 433,386 + +1.0 433,397 + +0.1 433,523 - -2.6 433,555 - +1.1 433,558 + +0.7 433,559 - +0.4 433,581 + -0.4 433,673 + -0.4 433,673 + -0.1 433,703 + -1.6 433,710 + -0.3 433,734 + +0.2
Or see this region's nucleotide sequence