Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4139 and GFF4140 are separated by 140 nucleotides GFF4140 and GFF4141 are separated by 2 nucleotides
GFF4139 - Dipeptidyl aminopeptidase BI, at 144,206 to 146,302
GFF4139
GFF4140 - hypothetical protein, at 146,443 to 147,774
GFF4140
GFF4141 - hypothetical protein, at 147,777 to 148,874
GFF4141
Position (kb) 146
147
148 Strain fitness (log2 ratio) -2
-1
0
1 at 145.496 kb on + strand, within GFF4139 at 145.496 kb on + strand, within GFF4139 at 145.497 kb on - strand, within GFF4139 at 145.497 kb on - strand, within GFF4139 at 145.559 kb on + strand, within GFF4139 at 145.559 kb on + strand, within GFF4139 at 145.560 kb on - strand, within GFF4139 at 145.560 kb on - strand, within GFF4139 at 145.560 kb on - strand, within GFF4139 at 145.604 kb on + strand, within GFF4139 at 145.610 kb on + strand, within GFF4139 at 145.619 kb on + strand, within GFF4139 at 145.685 kb on + strand, within GFF4139 at 145.685 kb on + strand, within GFF4139 at 145.685 kb on + strand, within GFF4139 at 145.686 kb on - strand, within GFF4139 at 145.733 kb on + strand, within GFF4139 at 145.734 kb on - strand, within GFF4139 at 145.734 kb on - strand, within GFF4139 at 145.734 kb on - strand, within GFF4139 at 146.056 kb on + strand, within GFF4139 at 146.056 kb on + strand, within GFF4139 at 146.056 kb on + strand, within GFF4139 at 146.057 kb on - strand, within GFF4139 at 146.076 kb on - strand, within GFF4139 at 146.123 kb on + strand at 146.123 kb on + strand at 146.123 kb on + strand at 146.264 kb on + strand at 146.265 kb on - strand at 146.374 kb on + strand at 146.429 kb on + strand at 146.429 kb on + strand at 146.429 kb on + strand at 146.429 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 145,496 + GFF4139 0.62 +0.4 145,496 + GFF4139 0.62 -1.6 145,497 - GFF4139 0.62 -1.6 145,497 - GFF4139 0.62 -1.1 145,559 + GFF4139 0.65 -0.3 145,559 + GFF4139 0.65 -0.2 145,560 - GFF4139 0.65 -1.5 145,560 - GFF4139 0.65 +0.1 145,560 - GFF4139 0.65 -1.0 145,604 + GFF4139 0.67 +0.6 145,610 + GFF4139 0.67 -0.1 145,619 + GFF4139 0.67 -0.1 145,685 + GFF4139 0.71 -2.1 145,685 + GFF4139 0.71 -0.2 145,685 + GFF4139 0.71 -1.1 145,686 - GFF4139 0.71 -0.2 145,733 + GFF4139 0.73 +0.0 145,734 - GFF4139 0.73 -1.4 145,734 - GFF4139 0.73 +0.1 145,734 - GFF4139 0.73 +1.4 146,056 + GFF4139 0.88 +0.5 146,056 + GFF4139 0.88 +0.1 146,056 + GFF4139 0.88 -0.6 146,057 - GFF4139 0.88 -0.2 146,076 - GFF4139 0.89 -0.5 146,123 + -2.0 146,123 + +0.8 146,123 + -1.1 146,264 + -0.5 146,265 - -0.1 146,374 + +0.1 146,429 + +0.1 146,429 + -1.8 146,429 + -1.1 146,429 + +0.8
Or see this region's nucleotide sequence