Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4104 and GFF4105 are separated by 21 nucleotides GFF4105 and GFF4106 overlap by 8 nucleotides GFF4106 and GFF4107 are separated by 315 nucleotides
GFF4104 - hypothetical protein, at 96,714 to 97,520
GFF4104
GFF4105 - hypothetical protein, at 97,542 to 97,883
GFF4105
GFF4106 - P-loop guanosine triphosphatase YjiA, at 97,876 to 98,910
GFF4106
GFF4107 - Protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 99,226 to 100,446
GFF4107
Position (kb) 97
98
99 Strain fitness (log2 ratio) -2
-1
0
1
2 at 97.242 kb on + strand, within GFF4104 at 97.242 kb on + strand, within GFF4104 at 97.242 kb on + strand, within GFF4104 at 97.242 kb on + strand, within GFF4104 at 97.242 kb on + strand, within GFF4104 at 97.242 kb on + strand, within GFF4104 at 97.243 kb on - strand, within GFF4104 at 97.243 kb on - strand, within GFF4104 at 97.293 kb on + strand, within GFF4104 at 97.293 kb on + strand, within GFF4104 at 97.293 kb on + strand, within GFF4104 at 97.293 kb on + strand, within GFF4104 at 97.294 kb on - strand, within GFF4104 at 97.294 kb on - strand, within GFF4104 at 97.294 kb on - strand, within GFF4104 at 97.294 kb on - strand, within GFF4104 at 97.320 kb on + strand, within GFF4104 at 97.321 kb on - strand, within GFF4104 at 97.321 kb on - strand, within GFF4104 at 97.321 kb on - strand, within GFF4104 at 97.638 kb on + strand, within GFF4105 at 98.909 kb on - strand at 98.909 kb on - strand at 98.973 kb on + strand at 99.373 kb on + strand, within GFF4107 at 99.374 kb on - strand, within GFF4107 at 99.374 kb on - strand, within GFF4107 at 99.487 kb on + strand, within GFF4107 at 99.488 kb on - strand, within GFF4107 at 99.488 kb on - strand, within GFF4107 at 99.877 kb on + strand, within GFF4107
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 97,242 + GFF4104 0.65 +0.2 97,242 + GFF4104 0.65 -0.5 97,242 + GFF4104 0.65 +0.4 97,242 + GFF4104 0.65 +1.0 97,242 + GFF4104 0.65 +0.4 97,242 + GFF4104 0.65 +0.9 97,243 - GFF4104 0.66 -0.0 97,243 - GFF4104 0.66 -0.2 97,293 + GFF4104 0.72 +0.2 97,293 + GFF4104 0.72 +0.4 97,293 + GFF4104 0.72 +0.6 97,293 + GFF4104 0.72 -0.0 97,294 - GFF4104 0.72 +0.2 97,294 - GFF4104 0.72 -0.2 97,294 - GFF4104 0.72 -0.2 97,294 - GFF4104 0.72 -1.1 97,320 + GFF4104 0.75 +0.0 97,321 - GFF4104 0.75 -0.5 97,321 - GFF4104 0.75 +0.2 97,321 - GFF4104 0.75 +0.5 97,638 + GFF4105 0.28 -0.6 98,909 - +0.1 98,909 - -0.1 98,973 + -2.6 99,373 + GFF4107 0.12 +2.5 99,374 - GFF4107 0.12 +0.6 99,374 - GFF4107 0.12 +1.0 99,487 + GFF4107 0.21 +0.1 99,488 - GFF4107 0.21 +0.0 99,488 - GFF4107 0.21 +0.2 99,877 + GFF4107 0.53 -0.1
Or see this region's nucleotide sequence