Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3956 and GFF3957 are separated by 96 nucleotides GFF3957 and GFF3958 are separated by 217 nucleotides
GFF3956 - hypothetical protein, at 323,109 to 325,109
GFF3956
GFF3957 - Regulator of RpoS, at 325,206 to 325,931
GFF3957
GFF3958 - hypothetical protein, at 326,149 to 328,053
GFF3958
Position (kb) 325
326 Strain fitness (log2 ratio) -2
-1
0
1 at 324.234 kb on - strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.329 kb on - strand, within GFF3956 at 324.529 kb on + strand, within GFF3956 at 324.530 kb on - strand, within GFF3956 at 324.566 kb on + strand, within GFF3956 at 324.829 kb on + strand, within GFF3956 at 324.830 kb on - strand, within GFF3956 at 325.086 kb on - strand at 325.254 kb on - strand at 325.351 kb on + strand, within GFF3957 at 325.352 kb on - strand, within GFF3957 at 325.597 kb on - strand, within GFF3957 at 325.597 kb on - strand, within GFF3957 at 326.024 kb on + strand at 326.024 kb on + strand at 326.025 kb on - strand at 326.312 kb on - strand at 326.312 kb on - strand at 326.389 kb on + strand, within GFF3958 at 326.389 kb on + strand, within GFF3958 at 326.390 kb on - strand, within GFF3958 at 326.390 kb on - strand, within GFF3958 at 326.461 kb on + strand, within GFF3958 at 326.501 kb on - strand, within GFF3958 at 326.501 kb on - strand, within GFF3958 at 326.555 kb on - strand, within GFF3958
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 324,234 - GFF3956 0.56 +1.5 324,328 + GFF3956 0.61 -0.0 324,328 + GFF3956 0.61 +0.4 324,328 + GFF3956 0.61 +1.7 324,328 + GFF3956 0.61 +0.2 324,328 + GFF3956 0.61 -0.9 324,328 + GFF3956 0.61 -0.5 324,328 + GFF3956 0.61 +0.8 324,328 + GFF3956 0.61 +1.1 324,329 - GFF3956 0.61 -0.9 324,529 + GFF3956 0.71 +0.8 324,530 - GFF3956 0.71 +0.5 324,566 + GFF3956 0.73 +0.4 324,829 + GFF3956 0.86 +0.1 324,830 - GFF3956 0.86 -2.7 325,086 - +1.0 325,254 - +0.5 325,351 + GFF3957 0.20 -1.0 325,352 - GFF3957 0.20 -2.0 325,597 - GFF3957 0.54 -1.2 325,597 - GFF3957 0.54 -0.1 326,024 + -0.0 326,024 + +0.1 326,025 - +0.4 326,312 - -0.2 326,312 - -0.6 326,389 + GFF3958 0.13 -0.3 326,389 + GFF3958 0.13 +0.4 326,390 - GFF3958 0.13 +0.2 326,390 - GFF3958 0.13 -0.0 326,461 + GFF3958 0.16 -0.1 326,501 - GFF3958 0.18 -0.5 326,501 - GFF3958 0.18 +0.3 326,555 - GFF3958 0.21 -0.0
Or see this region's nucleotide sequence