Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3914 and GFF3915 are separated by 469 nucleotides GFF3915 and GFF3916 are separated by 184 nucleotides
GFF3914 - Adenosylhomocysteinase, at 281,704 to 283,101
GFF3914
GFF3915 - Low affinity potassium transport system protein kup, at 283,571 to 285,457
GFF3915
GFF3916 - Inner membrane protein YbhN, at 285,642 to 286,685
GFF3916
Position (kb) 283
284
285
286 Strain fitness (log2 ratio) -1
0
1 at 283.220 kb on + strand at 283.674 kb on - strand at 283.674 kb on - strand at 283.787 kb on + strand, within GFF3915 at 283.787 kb on + strand, within GFF3915 at 283.890 kb on - strand, within GFF3915 at 284.144 kb on + strand, within GFF3915 at 284.364 kb on - strand, within GFF3915 at 284.364 kb on - strand, within GFF3915 at 284.547 kb on - strand, within GFF3915 at 284.547 kb on - strand, within GFF3915 at 284.570 kb on + strand, within GFF3915 at 284.600 kb on + strand, within GFF3915 at 284.600 kb on + strand, within GFF3915 at 284.600 kb on + strand, within GFF3915 at 284.601 kb on - strand, within GFF3915 at 284.601 kb on - strand, within GFF3915 at 284.601 kb on - strand, within GFF3915 at 284.950 kb on + strand, within GFF3915 at 284.950 kb on + strand, within GFF3915 at 285.213 kb on - strand, within GFF3915 at 285.509 kb on + strand at 285.509 kb on + strand at 285.509 kb on + strand at 285.510 kb on - strand at 285.593 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 283,220 + -0.1 283,674 - -0.6 283,674 - -0.6 283,787 + GFF3915 0.11 -1.5 283,787 + GFF3915 0.11 +0.6 283,890 - GFF3915 0.17 -0.8 284,144 + GFF3915 0.30 -0.5 284,364 - GFF3915 0.42 +0.5 284,364 - GFF3915 0.42 -1.0 284,547 - GFF3915 0.52 -1.6 284,547 - GFF3915 0.52 -0.5 284,570 + GFF3915 0.53 +0.3 284,600 + GFF3915 0.55 -1.4 284,600 + GFF3915 0.55 +0.1 284,600 + GFF3915 0.55 -0.3 284,601 - GFF3915 0.55 -0.3 284,601 - GFF3915 0.55 +0.2 284,601 - GFF3915 0.55 -1.4 284,950 + GFF3915 0.73 -0.6 284,950 + GFF3915 0.73 -1.2 285,213 - GFF3915 0.87 +0.2 285,509 + -0.3 285,509 + +0.1 285,509 + -0.3 285,510 - -1.2 285,593 + -0.3
Or see this region's nucleotide sequence