Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3866 and GFF3867 are separated by 109 nucleotides GFF3867 and GFF3868 are separated by 43 nucleotides GFF3868 and GFF3869 are separated by 33 nucleotides GFF3869 and GFF3870 are separated by 10 nucleotides
GFF3866 - hypothetical protein, at 231,957 to 232,922
GFF3866
GFF3867 - hypothetical protein, at 233,032 to 233,787
GFF3867
GFF3868 - hypothetical protein, at 233,831 to 234,637
GFF3868
GFF3869 - hypothetical protein, at 234,671 to 235,087
GFF3869
GFF3870 - Glutathione-specific gamma-glutamylcyclotransferase, at 235,098 to 235,766
GFF3870
Position (kb) 233
234
235 Strain fitness (log2 ratio) -1
0
1 at 233.591 kb on - strand, within GFF3867 at 233.637 kb on + strand, within GFF3867 at 233.665 kb on + strand, within GFF3867 at 233.669 kb on - strand, within GFF3867 at 233.669 kb on - strand, within GFF3867 at 233.888 kb on + strand at 235.178 kb on - strand, within GFF3870 at 235.178 kb on - strand, within GFF3870 at 235.178 kb on - strand, within GFF3870 at 235.237 kb on + strand, within GFF3870 at 235.238 kb on - strand, within GFF3870 at 235.238 kb on - strand, within GFF3870 at 235.238 kb on - strand, within GFF3870 at 235.316 kb on - strand, within GFF3870 at 235.342 kb on + strand, within GFF3870 at 235.342 kb on + strand, within GFF3870 at 235.343 kb on - strand, within GFF3870 at 235.343 kb on - strand, within GFF3870 at 235.409 kb on - strand, within GFF3870 at 235.441 kb on + strand, within GFF3870 at 235.565 kb on - strand, within GFF3870
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 233,591 - GFF3867 0.74 +0.1 233,637 + GFF3867 0.80 -0.5 233,665 + GFF3867 0.84 +0.3 233,669 - GFF3867 0.84 -0.3 233,669 - GFF3867 0.84 +0.7 233,888 + +0.5 235,178 - GFF3870 0.12 -0.6 235,178 - GFF3870 0.12 -0.0 235,178 - GFF3870 0.12 -1.0 235,237 + GFF3870 0.21 -0.3 235,238 - GFF3870 0.21 +0.5 235,238 - GFF3870 0.21 -0.5 235,238 - GFF3870 0.21 +0.5 235,316 - GFF3870 0.33 -0.0 235,342 + GFF3870 0.36 -0.5 235,342 + GFF3870 0.36 -1.1 235,343 - GFF3870 0.37 -0.7 235,343 - GFF3870 0.37 -0.8 235,409 - GFF3870 0.46 -0.7 235,441 + GFF3870 0.51 +0.6 235,565 - GFF3870 0.70 +0.3
Or see this region's nucleotide sequence