Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3847 and GFF3848 are separated by 196 nucleotides GFF3848 and GFF3849 are separated by 39 nucleotides
GFF3847 - Bifunctional purine biosynthesis protein PurH, at 210,283 to 211,872
GFF3847
GFF3848 - DNA mismatch repair protein MutS, at 212,069 to 214,855
GFF3848
GFF3849 - hypothetical protein, at 214,895 to 216,268
GFF3849
Position (kb) 212
213
214
215 Strain fitness (log2 ratio) -2
-1
0
1 at 212.210 kb on + strand at 212.210 kb on + strand at 212.210 kb on + strand at 212.211 kb on - strand at 212.211 kb on - strand at 212.252 kb on + strand at 212.270 kb on + strand at 212.270 kb on + strand at 212.271 kb on - strand at 212.271 kb on - strand at 212.396 kb on + strand, within GFF3848 at 212.396 kb on + strand, within GFF3848 at 212.397 kb on - strand, within GFF3848 at 212.397 kb on - strand, within GFF3848 at 212.616 kb on - strand, within GFF3848 at 212.930 kb on + strand, within GFF3848 at 212.930 kb on + strand, within GFF3848 at 212.931 kb on - strand, within GFF3848 at 213.575 kb on + strand, within GFF3848 at 213.576 kb on - strand, within GFF3848 at 213.576 kb on - strand, within GFF3848 at 213.576 kb on - strand, within GFF3848 at 213.576 kb on - strand, within GFF3848 at 213.635 kb on + strand, within GFF3848 at 213.635 kb on + strand, within GFF3848 at 213.635 kb on + strand, within GFF3848 at 213.635 kb on + strand, within GFF3848 at 213.635 kb on + strand, within GFF3848 at 213.636 kb on - strand, within GFF3848 at 213.636 kb on - strand, within GFF3848 at 214.112 kb on - strand, within GFF3848 at 214.566 kb on - strand, within GFF3848 at 214.849 kb on + strand at 214.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 212,210 + -0.6 212,210 + -0.2 212,210 + -1.7 212,211 - -0.0 212,211 - +1.2 212,252 + -1.3 212,270 + +0.8 212,270 + -0.3 212,271 - +0.2 212,271 - -1.3 212,396 + GFF3848 0.12 -1.2 212,396 + GFF3848 0.12 -0.4 212,397 - GFF3848 0.12 +1.0 212,397 - GFF3848 0.12 -0.3 212,616 - GFF3848 0.20 -0.2 212,930 + GFF3848 0.31 -0.2 212,930 + GFF3848 0.31 -0.4 212,931 - GFF3848 0.31 -0.8 213,575 + GFF3848 0.54 -0.5 213,576 - GFF3848 0.54 -1.9 213,576 - GFF3848 0.54 +0.2 213,576 - GFF3848 0.54 +1.0 213,576 - GFF3848 0.54 -0.0 213,635 + GFF3848 0.56 +0.4 213,635 + GFF3848 0.56 +0.2 213,635 + GFF3848 0.56 -0.5 213,635 + GFF3848 0.56 -0.5 213,635 + GFF3848 0.56 -1.0 213,636 - GFF3848 0.56 +0.1 213,636 - GFF3848 0.56 -0.2 214,112 - GFF3848 0.73 -0.0 214,566 - GFF3848 0.90 +1.4 214,849 + -0.1 214,850 - +0.2
Or see this region's nucleotide sequence