Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3845 and GFF3846 are separated by 40 nucleotides GFF3846 and GFF3847 are separated by 171 nucleotides GFF3847 and GFF3848 are separated by 196 nucleotides
GFF3845 - hypothetical protein, at 209,217 to 209,618
GFF3845
GFF3846 - hypothetical protein, at 209,659 to 210,111
GFF3846
GFF3847 - Bifunctional purine biosynthesis protein PurH, at 210,283 to 211,872
GFF3847
GFF3848 - DNA mismatch repair protein MutS, at 212,069 to 214,855
GFF3848
Position (kb) 210
211
212 Strain fitness (log2 ratio) -2
-1
0
1 at 209.297 kb on - strand, within GFF3845 at 209.341 kb on + strand, within GFF3845 at 209.347 kb on + strand, within GFF3845 at 209.471 kb on - strand, within GFF3845 at 209.504 kb on + strand, within GFF3845 at 209.504 kb on + strand, within GFF3845 at 209.505 kb on - strand, within GFF3845 at 209.505 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.698 kb on + strand at 209.972 kb on + strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 212.210 kb on + strand at 212.210 kb on + strand at 212.210 kb on + strand at 212.211 kb on - strand at 212.211 kb on - strand at 212.252 kb on + strand at 212.270 kb on + strand at 212.270 kb on + strand at 212.271 kb on - strand at 212.271 kb on - strand at 212.396 kb on + strand, within GFF3848 at 212.396 kb on + strand, within GFF3848 at 212.397 kb on - strand, within GFF3848 at 212.397 kb on - strand, within GFF3848 at 212.616 kb on - strand, within GFF3848
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 209,297 - GFF3845 0.20 -0.3 209,341 + GFF3845 0.31 -1.1 209,347 + GFF3845 0.32 +0.5 209,471 - GFF3845 0.63 +0.2 209,504 + GFF3845 0.71 -0.1 209,504 + GFF3845 0.71 +0.3 209,505 - GFF3845 0.72 +0.1 209,505 - GFF3845 0.72 -0.6 209,507 - GFF3845 0.72 -0.8 209,507 - GFF3845 0.72 -0.1 209,507 - GFF3845 0.72 -0.0 209,507 - GFF3845 0.72 -0.4 209,698 + -0.0 209,972 + GFF3846 0.69 -0.2 209,973 - GFF3846 0.69 +0.9 209,973 - GFF3846 0.69 -2.1 209,973 - GFF3846 0.69 +0.8 209,973 - GFF3846 0.69 +0.1 212,210 + -0.6 212,210 + -0.2 212,210 + -1.7 212,211 - -0.0 212,211 - +1.2 212,252 + -1.3 212,270 + +0.8 212,270 + -0.3 212,271 - +0.2 212,271 - -1.3 212,396 + GFF3848 0.12 -1.2 212,396 + GFF3848 0.12 -0.4 212,397 - GFF3848 0.12 +1.0 212,397 - GFF3848 0.12 -0.3 212,616 - GFF3848 0.20 -0.2
Or see this region's nucleotide sequence