Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3716 and GFF3717 are separated by 352 nucleotides GFF3717 and GFF3718 are separated by 89 nucleotides
GFF3716 - Undecaprenyl-diphosphatase, at 57,631 to 58,437
GFF3716
GFF3717 - FtsZ-localized protein A, at 58,790 to 59,479
GFF3717
GFF3718 - Epoxyqueuosine reductase, at 59,569 to 60,624
GFF3718
Position (kb) 58
59
60 Strain fitness (log2 ratio) -2
-1
0
1
2 at 57.811 kb on - strand, within GFF3716 at 57.833 kb on + strand, within GFF3716 at 58.025 kb on + strand, within GFF3716 at 58.025 kb on + strand, within GFF3716 at 58.025 kb on + strand, within GFF3716 at 58.253 kb on + strand, within GFF3716 at 58.593 kb on - strand at 58.610 kb on + strand at 58.730 kb on + strand at 59.614 kb on + strand at 59.615 kb on - strand at 59.713 kb on + strand, within GFF3718 at 59.714 kb on - strand, within GFF3718 at 59.714 kb on - strand, within GFF3718 at 59.794 kb on + strand, within GFF3718 at 59.795 kb on - strand, within GFF3718 at 59.805 kb on + strand, within GFF3718 at 59.805 kb on + strand, within GFF3718 at 59.806 kb on - strand, within GFF3718 at 59.806 kb on - strand, within GFF3718 at 60.028 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.142 kb on + strand, within GFF3718 at 60.142 kb on + strand, within GFF3718 at 60.208 kb on + strand, within GFF3718 at 60.208 kb on + strand, within GFF3718
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 57,811 - GFF3716 0.22 +1.0 57,833 + GFF3716 0.25 -0.3 58,025 + GFF3716 0.49 -0.9 58,025 + GFF3716 0.49 -1.5 58,025 + GFF3716 0.49 +0.6 58,253 + GFF3716 0.77 +0.7 58,593 - +0.2 58,610 + -0.5 58,730 + -0.1 59,614 + -0.2 59,615 - +0.3 59,713 + GFF3718 0.14 -2.0 59,714 - GFF3718 0.14 +2.3 59,714 - GFF3718 0.14 +0.6 59,794 + GFF3718 0.21 +0.2 59,795 - GFF3718 0.21 -0.3 59,805 + GFF3718 0.22 -0.5 59,805 + GFF3718 0.22 +0.6 59,806 - GFF3718 0.22 -1.3 59,806 - GFF3718 0.22 -1.3 60,028 - GFF3718 0.43 -0.0 60,113 - GFF3718 0.52 +0.5 60,113 - GFF3718 0.52 +0.6 60,113 - GFF3718 0.52 +1.5 60,113 - GFF3718 0.52 +1.8 60,142 + GFF3718 0.54 +2.2 60,142 + GFF3718 0.54 +2.1 60,208 + GFF3718 0.61 -1.1 60,208 + GFF3718 0.61 +2.5
Or see this region's nucleotide sequence