Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF369 and GFF370 are separated by 773 nucleotides GFF370 and GFF371 overlap by 4 nucleotides GFF371 and GFF372 overlap by 1 nucleotides
GFF369 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 381,291 to 382,304
GFF369
GFF370 - Bifunctional adenosylcobalamin biosynthesis protein CobP, at 383,078 to 383,698
GFF370
GFF371 - Corrinoid adenosyltransferase, at 383,695 to 384,327
GFF371
GFF372 - Cobyric acid synthase, at 384,327 to 385,781
GFF372
Position (kb) 383
384 Strain fitness (log2 ratio) -2
-1
0
1 at 382.140 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.173 kb on + strand, within GFF369 at 382.174 kb on - strand, within GFF369 at 382.264 kb on - strand at 382.264 kb on - strand at 382.545 kb on + strand at 382.546 kb on - strand at 382.546 kb on - strand at 382.661 kb on - strand at 382.716 kb on + strand at 382.867 kb on - strand at 383.025 kb on + strand at 383.026 kb on - strand at 383.158 kb on + strand, within GFF370
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 382,140 + GFF369 0.84 +0.2 382,140 + GFF369 0.84 -0.8 382,140 + GFF369 0.84 -0.8 382,140 + GFF369 0.84 +0.3 382,141 - GFF369 0.84 +1.4 382,141 - GFF369 0.84 +1.4 382,141 - GFF369 0.84 -0.3 382,141 - GFF369 0.84 -1.5 382,141 - GFF369 0.84 +0.1 382,173 + GFF369 0.87 -0.9 382,174 - GFF369 0.87 -1.6 382,264 - -0.1 382,264 - +0.3 382,545 + +1.2 382,546 - -0.2 382,546 - -0.0 382,661 - -1.6 382,716 + -0.3 382,867 - +1.1 383,025 + -2.7 383,026 - -0.8 383,158 + GFF370 0.13 +0.7
Or see this region's nucleotide sequence