Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF367 and GFF368 overlap by 4 nucleotides GFF368 and GFF369 are separated by 88 nucleotides
GFF367 - ADP-heptose--LPS heptosyltransferase 2, at 379,173 to 380,195
GFF367
GFF368 - Lipopolysaccharide heptosyltransferase 1, at 380,192 to 381,202
GFF368
GFF369 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 381,291 to 382,304
GFF369
Position (kb) 380
381
382 Strain fitness (log2 ratio) -1
0
1 at 381.204 kb on - strand at 381.204 kb on - strand at 381.239 kb on + strand at 381.240 kb on - strand at 381.240 kb on - strand at 381.669 kb on + strand, within GFF369 at 381.744 kb on + strand, within GFF369 at 381.745 kb on - strand, within GFF369 at 381.766 kb on + strand, within GFF369 at 381.767 kb on - strand, within GFF369 at 381.767 kb on - strand, within GFF369 at 381.767 kb on - strand, within GFF369 at 381.846 kb on + strand, within GFF369 at 381.847 kb on - strand, within GFF369 at 381.847 kb on - strand, within GFF369 at 381.990 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.140 kb on + strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.141 kb on - strand, within GFF369 at 382.173 kb on + strand, within GFF369 at 382.174 kb on - strand, within GFF369
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 381,204 - +0.1 381,204 - +0.5 381,239 + +0.9 381,240 - -0.5 381,240 - -0.2 381,669 + GFF369 0.37 +0.6 381,744 + GFF369 0.45 -0.3 381,745 - GFF369 0.45 -0.9 381,766 + GFF369 0.47 +0.3 381,767 - GFF369 0.47 -0.8 381,767 - GFF369 0.47 +0.3 381,767 - GFF369 0.47 +0.4 381,846 + GFF369 0.55 +0.9 381,847 - GFF369 0.55 -1.2 381,847 - GFF369 0.55 +0.3 381,990 + GFF369 0.69 -1.3 382,140 + GFF369 0.84 +0.2 382,140 + GFF369 0.84 -0.8 382,140 + GFF369 0.84 -0.8 382,140 + GFF369 0.84 +0.3 382,141 - GFF369 0.84 +1.4 382,141 - GFF369 0.84 +1.4 382,141 - GFF369 0.84 -0.3 382,141 - GFF369 0.84 -1.5 382,141 - GFF369 0.84 +0.1 382,173 + GFF369 0.87 -0.9 382,174 - GFF369 0.87 -1.6
Or see this region's nucleotide sequence