Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3657 and GFF3658 are separated by 134 nucleotides GFF3658 and GFF3659 are separated by 308 nucleotides GFF3659 and GFF3660 are separated by 63 nucleotides
GFF3657 - hypothetical protein, at 523,107 to 523,541
GFF3657
GFF3658 - hypothetical protein, at 523,676 to 523,843
GFF3658
GFF3659 - hypothetical protein, at 524,152 to 524,520
GFF3659
GFF3660 - hypothetical protein, at 524,584 to 525,504
GFF3660
Position (kb) 523
524 Strain fitness (log2 ratio) -2
-1
0
1
2 at 522.761 kb on + strand at 522.761 kb on + strand at 522.762 kb on - strand at 522.807 kb on + strand at 522.807 kb on + strand at 522.807 kb on + strand at 522.808 kb on - strand at 522.808 kb on - strand at 522.839 kb on + strand at 522.896 kb on + strand at 522.897 kb on - strand at 523.073 kb on + strand at 523.116 kb on + strand at 523.117 kb on - strand at 523.117 kb on - strand at 523.117 kb on - strand at 523.249 kb on + strand, within GFF3657 at 523.249 kb on + strand, within GFF3657 at 523.249 kb on + strand, within GFF3657 at 523.249 kb on + strand, within GFF3657 at 523.249 kb on + strand, within GFF3657 at 523.250 kb on - strand, within GFF3657 at 523.250 kb on - strand, within GFF3657 at 523.261 kb on + strand, within GFF3657 at 523.261 kb on + strand, within GFF3657 at 523.359 kb on + strand, within GFF3657 at 523.359 kb on + strand, within GFF3657 at 523.359 kb on + strand, within GFF3657 at 523.359 kb on + strand, within GFF3657 at 523.359 kb on + strand, within GFF3657 at 523.359 kb on + strand, within GFF3657 at 523.360 kb on - strand, within GFF3657 at 523.360 kb on - strand, within GFF3657 at 523.360 kb on - strand, within GFF3657 at 523.420 kb on + strand, within GFF3657 at 523.421 kb on - strand, within GFF3657 at 523.421 kb on - strand, within GFF3657 at 523.421 kb on - strand, within GFF3657 at 523.421 kb on - strand, within GFF3657 at 523.421 kb on - strand, within GFF3657 at 523.421 kb on - strand, within GFF3657 at 523.440 kb on + strand, within GFF3657 at 523.441 kb on - strand, within GFF3657 at 523.441 kb on - strand, within GFF3657 at 523.610 kb on + strand at 523.619 kb on + strand at 523.619 kb on + strand at 523.619 kb on + strand at 523.619 kb on + strand at 523.620 kb on - strand at 524.085 kb on + strand at 524.086 kb on - strand at 524.086 kb on - strand at 524.086 kb on - strand at 524.086 kb on - strand at 524.158 kb on + strand at 524.158 kb on + strand at 524.159 kb on - strand at 524.159 kb on - strand at 524.159 kb on - strand at 524.159 kb on - strand at 524.159 kb on - strand at 524.168 kb on + strand at 524.320 kb on + strand, within GFF3659 at 524.320 kb on + strand, within GFF3659 at 524.321 kb on - strand, within GFF3659 at 524.321 kb on - strand, within GFF3659 at 524.321 kb on - strand, within GFF3659 at 524.362 kb on + strand, within GFF3659 at 524.363 kb on - strand, within GFF3659 at 524.363 kb on - strand, within GFF3659 at 524.437 kb on + strand, within GFF3659 at 524.437 kb on + strand, within GFF3659 at 524.437 kb on + strand, within GFF3659 at 524.438 kb on - strand, within GFF3659 at 524.440 kb on - strand, within GFF3659 at 524.518 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 522,761 + -0.7 522,761 + +1.2 522,762 - +2.0 522,807 + -0.5 522,807 + -1.9 522,807 + +0.4 522,808 - -0.1 522,808 - -0.0 522,839 + -0.1 522,896 + -1.2 522,897 - +0.6 523,073 + -0.7 523,116 + +0.5 523,117 - -0.1 523,117 - -0.4 523,117 - -0.5 523,249 + GFF3657 0.33 +1.5 523,249 + GFF3657 0.33 -1.4 523,249 + GFF3657 0.33 -0.7 523,249 + GFF3657 0.33 +0.1 523,249 + GFF3657 0.33 +0.8 523,250 - GFF3657 0.33 +0.3 523,250 - GFF3657 0.33 -0.7 523,261 + GFF3657 0.35 -0.7 523,261 + GFF3657 0.35 -0.5 523,359 + GFF3657 0.58 +0.1 523,359 + GFF3657 0.58 +0.6 523,359 + GFF3657 0.58 -1.9 523,359 + GFF3657 0.58 -1.5 523,359 + GFF3657 0.58 +0.0 523,359 + GFF3657 0.58 +1.0 523,360 - GFF3657 0.58 -0.5 523,360 - GFF3657 0.58 +0.1 523,360 - GFF3657 0.58 -1.3 523,420 + GFF3657 0.72 -0.2 523,421 - GFF3657 0.72 -0.6 523,421 - GFF3657 0.72 +0.3 523,421 - GFF3657 0.72 +0.2 523,421 - GFF3657 0.72 +0.4 523,421 - GFF3657 0.72 +0.5 523,421 - GFF3657 0.72 -0.7 523,440 + GFF3657 0.77 -0.7 523,441 - GFF3657 0.77 -0.3 523,441 - GFF3657 0.77 +0.4 523,610 + +0.2 523,619 + -1.3 523,619 + +0.2 523,619 + -0.5 523,619 + +0.7 523,620 - +0.1 524,085 + -0.5 524,086 - +0.5 524,086 - +0.3 524,086 - -0.5 524,086 - -0.4 524,158 + -0.6 524,158 + -0.5 524,159 - +0.8 524,159 - +0.5 524,159 - -0.5 524,159 - +1.3 524,159 - +0.3 524,168 + +1.4 524,320 + GFF3659 0.46 -1.3 524,320 + GFF3659 0.46 -1.0 524,321 - GFF3659 0.46 +0.0 524,321 - GFF3659 0.46 -1.5 524,321 - GFF3659 0.46 +0.0 524,362 + GFF3659 0.57 -0.1 524,363 - GFF3659 0.57 +0.3 524,363 - GFF3659 0.57 -1.3 524,437 + GFF3659 0.77 +0.0 524,437 + GFF3659 0.77 -0.6 524,437 + GFF3659 0.77 +0.8 524,438 - GFF3659 0.78 +0.3 524,440 - GFF3659 0.78 +0.9 524,518 + -0.6
Or see this region's nucleotide sequence