Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3632 and GFF3633 overlap by 4 nucleotides GFF3633 and GFF3634 are separated by 9 nucleotides GFF3634 and GFF3635 overlap by 4 nucleotides
GFF3632 - hypothetical protein, at 496,137 to 497,417
GFF3632
GFF3633 - hypothetical protein, at 497,414 to 497,674
GFF3633
GFF3634 - hypothetical protein, at 497,684 to 498,418
GFF3634
GFF3635 - Type IV secretion system protein virB4, at 498,415 to 500,844
GFF3635
Position (kb) 497
498 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 496.735 kb on + strand, within GFF3632 at 496.735 kb on + strand, within GFF3632 at 496.735 kb on + strand, within GFF3632 at 496.735 kb on + strand, within GFF3632 at 496.914 kb on + strand, within GFF3632 at 496.914 kb on + strand, within GFF3632 at 496.914 kb on + strand, within GFF3632 at 496.914 kb on + strand, within GFF3632 at 496.915 kb on - strand, within GFF3632 at 496.915 kb on - strand, within GFF3632 at 496.915 kb on - strand, within GFF3632 at 497.440 kb on + strand, within GFF3633 at 497.440 kb on + strand, within GFF3633 at 497.441 kb on - strand, within GFF3633 at 497.444 kb on + strand, within GFF3633 at 497.444 kb on + strand, within GFF3633 at 497.444 kb on + strand, within GFF3633 at 497.444 kb on + strand, within GFF3633 at 497.444 kb on + strand, within GFF3633 at 497.445 kb on - strand, within GFF3633 at 497.445 kb on - strand, within GFF3633 at 497.445 kb on - strand, within GFF3633 at 497.445 kb on - strand, within GFF3633 at 497.721 kb on + strand at 497.721 kb on + strand at 497.721 kb on + strand at 498.081 kb on + strand, within GFF3634 at 498.081 kb on + strand, within GFF3634 at 498.120 kb on + strand, within GFF3634 at 498.120 kb on + strand, within GFF3634 at 498.120 kb on + strand, within GFF3634 at 498.121 kb on - strand, within GFF3634 at 498.195 kb on + strand, within GFF3634 at 498.196 kb on - strand, within GFF3634 at 498.196 kb on - strand, within GFF3634 at 498.315 kb on + strand, within GFF3634 at 498.315 kb on + strand, within GFF3634 at 498.315 kb on + strand, within GFF3634 at 498.316 kb on - strand, within GFF3634 at 498.316 kb on - strand, within GFF3634 at 498.316 kb on - strand, within GFF3634 at 498.330 kb on + strand, within GFF3634 at 498.330 kb on + strand, within GFF3634 at 498.339 kb on + strand, within GFF3634 at 498.339 kb on + strand, within GFF3634 at 498.339 kb on + strand, within GFF3634 at 498.484 kb on + strand at 498.484 kb on + strand at 498.485 kb on - strand at 498.485 kb on - strand at 498.635 kb on + strand at 498.636 kb on - strand at 498.638 kb on + strand at 498.638 kb on + strand at 498.638 kb on + strand at 498.638 kb on + strand at 498.638 kb on + strand at 498.638 kb on + strand at 498.638 kb on + strand at 498.639 kb on - strand at 498.639 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 496,735 + GFF3632 0.47 +0.4 496,735 + GFF3632 0.47 +0.3 496,735 + GFF3632 0.47 +0.7 496,735 + GFF3632 0.47 +0.1 496,914 + GFF3632 0.61 -0.7 496,914 + GFF3632 0.61 -1.0 496,914 + GFF3632 0.61 -0.0 496,914 + GFF3632 0.61 +1.2 496,915 - GFF3632 0.61 +1.5 496,915 - GFF3632 0.61 +2.5 496,915 - GFF3632 0.61 +2.9 497,440 + GFF3633 0.10 -1.1 497,440 + GFF3633 0.10 -0.5 497,441 - GFF3633 0.10 +0.2 497,444 + GFF3633 0.11 +0.2 497,444 + GFF3633 0.11 +0.1 497,444 + GFF3633 0.11 +0.9 497,444 + GFF3633 0.11 +0.7 497,444 + GFF3633 0.11 -0.1 497,445 - GFF3633 0.12 +1.3 497,445 - GFF3633 0.12 +0.0 497,445 - GFF3633 0.12 -1.1 497,445 - GFF3633 0.12 -0.0 497,721 + +0.4 497,721 + -1.7 497,721 + -0.4 498,081 + GFF3634 0.54 +0.0 498,081 + GFF3634 0.54 -0.9 498,120 + GFF3634 0.59 +1.0 498,120 + GFF3634 0.59 -0.2 498,120 + GFF3634 0.59 -1.4 498,121 - GFF3634 0.59 +0.1 498,195 + GFF3634 0.70 -0.0 498,196 - GFF3634 0.70 -1.5 498,196 - GFF3634 0.70 -0.3 498,315 + GFF3634 0.86 +1.4 498,315 + GFF3634 0.86 +0.4 498,315 + GFF3634 0.86 +1.1 498,316 - GFF3634 0.86 +0.1 498,316 - GFF3634 0.86 -0.6 498,316 - GFF3634 0.86 -0.5 498,330 + GFF3634 0.88 +0.4 498,330 + GFF3634 0.88 +0.0 498,339 + GFF3634 0.89 -0.1 498,339 + GFF3634 0.89 +0.3 498,339 + GFF3634 0.89 +0.4 498,484 + -0.6 498,484 + -0.6 498,485 - +3.5 498,485 - +3.8 498,635 + -0.7 498,636 - +3.6 498,638 + -0.6 498,638 + -0.7 498,638 + +1.1 498,638 + -0.4 498,638 + +0.9 498,638 + -0.0 498,638 + +0.1 498,639 - +1.1 498,639 - +1.7
Or see this region's nucleotide sequence