Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3608 and GFF3609 are separated by 66 nucleotides GFF3609 and GFF3610 are separated by 222 nucleotides
GFF3608 - hypothetical protein, at 469,428 to 469,730
GFF3608
GFF3609 - hypothetical protein, at 469,797 to 470,051
GFF3609
GFF3610 - hypothetical protein, at 470,274 to 471,863
GFF3610
Position (kb) 469
470
471 Strain fitness (log2 ratio) -2
-1
0
1 at 468.845 kb on - strand at 468.845 kb on - strand at 468.871 kb on + strand at 468.871 kb on + strand at 468.871 kb on + strand at 468.871 kb on + strand at 468.872 kb on - strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.962 kb on - strand at 468.986 kb on + strand at 469.039 kb on - strand at 469.039 kb on - strand at 469.039 kb on - strand at 469.039 kb on - strand at 469.221 kb on + strand at 469.221 kb on + strand at 469.222 kb on - strand at 469.222 kb on - strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.397 kb on - strand at 469.514 kb on - strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.624 kb on + strand, within GFF3608 at 469.624 kb on + strand, within GFF3608 at 469.624 kb on + strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.682 kb on - strand, within GFF3608 at 469.710 kb on + strand at 469.710 kb on + strand at 469.711 kb on - strand at 469.711 kb on - strand at 469.761 kb on + strand at 469.761 kb on + strand at 469.761 kb on + strand at 469.761 kb on + strand at 469.761 kb on + strand at 469.761 kb on + strand at 469.762 kb on - strand at 469.762 kb on - strand at 469.762 kb on - strand at 469.762 kb on - strand at 469.762 kb on - strand at 469.762 kb on - strand at 469.762 kb on - strand at 469.834 kb on + strand, within GFF3609 at 469.878 kb on + strand, within GFF3609 at 469.878 kb on + strand, within GFF3609 at 469.878 kb on + strand, within GFF3609 at 469.878 kb on + strand, within GFF3609 at 469.879 kb on - strand, within GFF3609 at 469.879 kb on - strand, within GFF3609 at 469.879 kb on - strand, within GFF3609 at 469.879 kb on - strand, within GFF3609 at 469.975 kb on + strand, within GFF3609 at 469.975 kb on + strand, within GFF3609 at 469.976 kb on - strand, within GFF3609 at 469.981 kb on + strand, within GFF3609 at 469.981 kb on + strand, within GFF3609 at 469.981 kb on + strand, within GFF3609 at 469.981 kb on + strand, within GFF3609 at 469.982 kb on - strand, within GFF3609 at 470.063 kb on + strand at 470.063 kb on + strand at 470.064 kb on - strand at 470.085 kb on + strand at 470.085 kb on + strand at 470.086 kb on - strand at 470.168 kb on + strand at 470.169 kb on - strand at 470.169 kb on - strand at 470.169 kb on - strand at 470.169 kb on - strand at 470.169 kb on - strand at 470.209 kb on + strand at 470.209 kb on + strand at 470.209 kb on + strand at 470.210 kb on - strand at 470.210 kb on - strand at 470.210 kb on - strand at 470.240 kb on + strand at 470.241 kb on - strand at 470.241 kb on - strand at 470.241 kb on - strand at 470.241 kb on - strand at 470.241 kb on - strand at 470.241 kb on - strand at 470.254 kb on + strand at 470.254 kb on + strand at 470.255 kb on - strand at 470.255 kb on - strand at 470.320 kb on + strand at 470.320 kb on + strand at 470.321 kb on - strand at 470.321 kb on - strand at 470.380 kb on - strand at 470.421 kb on + strand at 470.422 kb on - strand at 470.422 kb on - strand at 470.422 kb on - strand at 470.422 kb on - strand at 470.448 kb on - strand, within GFF3610 at 470.468 kb on - strand, within GFF3610 at 470.492 kb on + strand, within GFF3610 at 470.493 kb on - strand, within GFF3610 at 470.493 kb on - strand, within GFF3610 at 470.495 kb on - strand, within GFF3610 at 470.506 kb on + strand, within GFF3610 at 470.542 kb on - strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.598 kb on + strand, within GFF3610 at 470.599 kb on - strand, within GFF3610 at 470.599 kb on - strand, within GFF3610 at 470.599 kb on - strand, within GFF3610 at 470.599 kb on - strand, within GFF3610 at 470.599 kb on - strand, within GFF3610 at 470.601 kb on + strand, within GFF3610 at 470.601 kb on + strand, within GFF3610 at 470.602 kb on - strand, within GFF3610 at 470.602 kb on - strand, within GFF3610 at 470.649 kb on + strand, within GFF3610 at 470.649 kb on + strand, within GFF3610 at 470.649 kb on + strand, within GFF3610 at 470.650 kb on - strand, within GFF3610 at 470.650 kb on - strand, within GFF3610 at 470.650 kb on - strand, within GFF3610 at 470.678 kb on + strand, within GFF3610 at 470.678 kb on + strand, within GFF3610 at 470.678 kb on + strand, within GFF3610 at 470.705 kb on - strand, within GFF3610 at 470.853 kb on + strand, within GFF3610 at 470.853 kb on + strand, within GFF3610 at 470.853 kb on + strand, within GFF3610 at 470.853 kb on + strand, within GFF3610 at 470.854 kb on - strand, within GFF3610 at 470.869 kb on + strand, within GFF3610 at 470.869 kb on + strand, within GFF3610 at 470.869 kb on + strand, within GFF3610 at 470.870 kb on - strand, within GFF3610 at 470.870 kb on - strand, within GFF3610 at 470.870 kb on - strand, within GFF3610 at 470.935 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.015 kb on + strand, within GFF3610 at 471.016 kb on - strand, within GFF3610 at 471.016 kb on - strand, within GFF3610 at 471.039 kb on + strand, within GFF3610 at 471.039 kb on + strand, within GFF3610 at 471.040 kb on - strand, within GFF3610 at 471.043 kb on + strand, within GFF3610 at 471.043 kb on + strand, within GFF3610 at 471.043 kb on + strand, within GFF3610 at 471.043 kb on + strand, within GFF3610 at 471.043 kb on + strand, within GFF3610 at 471.044 kb on - strand, within GFF3610 at 471.044 kb on - strand, within GFF3610 at 471.044 kb on - strand, within GFF3610 at 471.044 kb on - strand, within GFF3610 at 471.044 kb on - strand, within GFF3610 at 471.044 kb on - strand, within GFF3610 at 471.044 kb on - strand, within GFF3610
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 468,845 - +1.3 468,845 - +0.7 468,871 + -1.9 468,871 + +1.7 468,871 + +0.3 468,871 + +1.1 468,872 - -0.0 468,961 + +0.3 468,961 + +0.1 468,961 + -0.3 468,961 + +0.7 468,961 + -0.5 468,961 + -1.6 468,962 - -0.3 468,986 + +0.9 469,039 - +0.3 469,039 - -2.1 469,039 - -0.6 469,039 - -0.5 469,221 + +0.7 469,221 + -0.0 469,222 - -0.7 469,222 - -0.0 469,396 + +0.5 469,396 + -0.9 469,396 + -1.9 469,396 + -1.1 469,396 + -1.2 469,397 - +0.8 469,514 - GFF3608 0.28 +0.5 469,557 + GFF3608 0.43 -0.2 469,557 + GFF3608 0.43 -1.2 469,557 + GFF3608 0.43 -0.0 469,557 + GFF3608 0.43 -0.6 469,557 + GFF3608 0.43 +1.0 469,558 - GFF3608 0.43 +0.9 469,558 - GFF3608 0.43 +0.1 469,558 - GFF3608 0.43 +0.4 469,558 - GFF3608 0.43 +0.4 469,558 - GFF3608 0.43 +1.1 469,558 - GFF3608 0.43 -0.7 469,558 - GFF3608 0.43 +0.7 469,558 - GFF3608 0.43 +0.2 469,624 + GFF3608 0.65 +1.1 469,624 + GFF3608 0.65 -1.5 469,624 + GFF3608 0.65 +0.7 469,628 - GFF3608 0.66 +0.0 469,628 - GFF3608 0.66 -1.1 469,628 - GFF3608 0.66 -0.7 469,628 - GFF3608 0.66 +0.9 469,682 - GFF3608 0.84 -0.5 469,710 + -0.7 469,710 + +0.3 469,711 - -0.1 469,711 - -0.4 469,761 + +0.3 469,761 + +0.0 469,761 + -0.3 469,761 + -0.3 469,761 + -0.1 469,761 + +0.7 469,762 - +0.7 469,762 - +1.1 469,762 - +0.5 469,762 - +1.0 469,762 - -0.7 469,762 - -0.1 469,762 - -1.7 469,834 + GFF3609 0.15 -0.6 469,878 + GFF3609 0.32 -0.5 469,878 + GFF3609 0.32 +0.6 469,878 + GFF3609 0.32 -1.8 469,878 + GFF3609 0.32 -1.4 469,879 - GFF3609 0.32 -0.3 469,879 - GFF3609 0.32 +0.1 469,879 - GFF3609 0.32 +1.4 469,879 - GFF3609 0.32 +0.8 469,975 + GFF3609 0.70 -0.3 469,975 + GFF3609 0.70 -0.4 469,976 - GFF3609 0.70 -0.5 469,981 + GFF3609 0.72 +0.7 469,981 + GFF3609 0.72 +0.7 469,981 + GFF3609 0.72 -0.5 469,981 + GFF3609 0.72 -1.0 469,982 - GFF3609 0.73 -0.0 470,063 + -0.4 470,063 + +0.3 470,064 - +0.2 470,085 + +0.6 470,085 + +1.0 470,086 - -0.2 470,168 + -0.7 470,169 - +0.0 470,169 - +0.3 470,169 - +0.9 470,169 - +0.0 470,169 - -0.7 470,209 + -0.4 470,209 + +0.3 470,209 + +0.7 470,210 - +0.4 470,210 - +0.4 470,210 - +0.1 470,240 + +0.6 470,241 - -1.2 470,241 - -0.0 470,241 - -1.7 470,241 - +0.0 470,241 - -0.3 470,241 - +0.6 470,254 + -0.5 470,254 + +0.7 470,255 - -0.3 470,255 - +0.0 470,320 + +0.5 470,320 + -1.2 470,321 - -0.3 470,321 - +0.1 470,380 - -0.5 470,421 + -0.0 470,422 - +0.1 470,422 - +0.4 470,422 - -0.5 470,422 - +0.1 470,448 - GFF3610 0.11 +0.3 470,468 - GFF3610 0.12 +0.3 470,492 + GFF3610 0.14 +0.3 470,493 - GFF3610 0.14 -1.2 470,493 - GFF3610 0.14 -1.0 470,495 - GFF3610 0.14 +1.1 470,506 + GFF3610 0.15 -0.5 470,542 - GFF3610 0.17 -1.3 470,598 + GFF3610 0.20 +0.3 470,598 + GFF3610 0.20 -0.0 470,598 + GFF3610 0.20 -0.8 470,598 + GFF3610 0.20 -0.3 470,598 + GFF3610 0.20 -1.0 470,598 + GFF3610 0.20 -0.3 470,598 + GFF3610 0.20 +0.6 470,598 + GFF3610 0.20 -0.6 470,599 - GFF3610 0.20 -0.3 470,599 - GFF3610 0.20 -0.7 470,599 - GFF3610 0.20 -1.7 470,599 - GFF3610 0.20 -0.1 470,599 - GFF3610 0.20 +1.1 470,601 + GFF3610 0.21 +0.0 470,601 + GFF3610 0.21 +0.1 470,602 - GFF3610 0.21 +0.1 470,602 - GFF3610 0.21 +0.4 470,649 + GFF3610 0.24 +0.3 470,649 + GFF3610 0.24 -0.2 470,649 + GFF3610 0.24 -0.0 470,650 - GFF3610 0.24 +0.1 470,650 - GFF3610 0.24 +0.1 470,650 - GFF3610 0.24 -1.3 470,678 + GFF3610 0.25 -0.8 470,678 + GFF3610 0.25 -1.4 470,678 + GFF3610 0.25 -1.0 470,705 - GFF3610 0.27 -1.0 470,853 + GFF3610 0.36 -0.5 470,853 + GFF3610 0.36 -0.0 470,853 + GFF3610 0.36 -1.5 470,853 + GFF3610 0.36 +0.3 470,854 - GFF3610 0.36 +0.3 470,869 + GFF3610 0.37 +1.6 470,869 + GFF3610 0.37 -2.3 470,869 + GFF3610 0.37 +0.8 470,870 - GFF3610 0.37 -0.1 470,870 - GFF3610 0.37 +0.5 470,870 - GFF3610 0.37 -0.3 470,935 + GFF3610 0.42 -0.3 471,015 + GFF3610 0.47 -1.0 471,015 + GFF3610 0.47 +0.4 471,015 + GFF3610 0.47 -0.1 471,015 + GFF3610 0.47 +1.3 471,015 + GFF3610 0.47 -0.0 471,015 + GFF3610 0.47 -1.2 471,015 + GFF3610 0.47 -0.9 471,015 + GFF3610 0.47 +0.3 471,016 - GFF3610 0.47 +0.9 471,016 - GFF3610 0.47 +0.2 471,039 + GFF3610 0.48 -0.8 471,039 + GFF3610 0.48 -0.6 471,040 - GFF3610 0.48 -1.8 471,043 + GFF3610 0.48 +0.1 471,043 + GFF3610 0.48 -2.1 471,043 + GFF3610 0.48 -0.1 471,043 + GFF3610 0.48 +1.0 471,043 + GFF3610 0.48 -1.3 471,044 - GFF3610 0.48 +0.5 471,044 - GFF3610 0.48 +0.4 471,044 - GFF3610 0.48 +0.5 471,044 - GFF3610 0.48 +0.1 471,044 - GFF3610 0.48 +1.3 471,044 - GFF3610 0.48 +0.2 471,044 - GFF3610 0.48 -0.2
Or see this region's nucleotide sequence