Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3606 and GFF3607 are separated by 102 nucleotides GFF3607 and GFF3608 are separated by 741 nucleotides
GFF3606 - hypothetical protein, at 467,754 to 468,341
GFF3606
GFF3607 - hypothetical protein, at 468,444 to 468,686
GFF3607
GFF3608 - hypothetical protein, at 469,428 to 469,730
GFF3608
Position (kb) 468
469 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 467.532 kb on + strand at 467.532 kb on + strand at 467.532 kb on + strand at 467.533 kb on - strand at 467.533 kb on - strand at 467.580 kb on - strand at 467.580 kb on - strand at 467.735 kb on + strand at 467.817 kb on + strand, within GFF3606 at 467.879 kb on + strand, within GFF3606 at 467.879 kb on + strand, within GFF3606 at 467.944 kb on + strand, within GFF3606 at 467.944 kb on + strand, within GFF3606 at 467.944 kb on + strand, within GFF3606 at 467.971 kb on + strand, within GFF3606 at 467.971 kb on + strand, within GFF3606 at 467.971 kb on + strand, within GFF3606 at 468.097 kb on + strand, within GFF3606 at 468.097 kb on + strand, within GFF3606 at 468.097 kb on + strand, within GFF3606 at 468.098 kb on - strand, within GFF3606 at 468.187 kb on + strand, within GFF3606 at 468.187 kb on + strand, within GFF3606 at 468.187 kb on + strand, within GFF3606 at 468.188 kb on - strand, within GFF3606 at 468.188 kb on - strand, within GFF3606 at 468.188 kb on - strand, within GFF3606 at 468.188 kb on - strand, within GFF3606 at 468.188 kb on - strand, within GFF3606 at 468.188 kb on - strand, within GFF3606 at 468.253 kb on + strand, within GFF3606 at 468.277 kb on + strand, within GFF3606 at 468.277 kb on + strand, within GFF3606 at 468.278 kb on - strand, within GFF3606 at 468.402 kb on + strand at 468.721 kb on + strand at 468.721 kb on + strand at 468.721 kb on + strand at 468.721 kb on + strand at 468.721 kb on + strand at 468.722 kb on - strand at 468.722 kb on - strand at 468.722 kb on - strand at 468.734 kb on + strand at 468.734 kb on + strand at 468.734 kb on + strand at 468.735 kb on - strand at 468.735 kb on - strand at 468.735 kb on - strand at 468.735 kb on - strand at 468.845 kb on - strand at 468.845 kb on - strand at 468.871 kb on + strand at 468.871 kb on + strand at 468.871 kb on + strand at 468.871 kb on + strand at 468.872 kb on - strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.961 kb on + strand at 468.962 kb on - strand at 468.986 kb on + strand at 469.039 kb on - strand at 469.039 kb on - strand at 469.039 kb on - strand at 469.039 kb on - strand at 469.221 kb on + strand at 469.221 kb on + strand at 469.222 kb on - strand at 469.222 kb on - strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.396 kb on + strand at 469.397 kb on - strand at 469.514 kb on - strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.557 kb on + strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.558 kb on - strand, within GFF3608 at 469.624 kb on + strand, within GFF3608 at 469.624 kb on + strand, within GFF3608 at 469.624 kb on + strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.628 kb on - strand, within GFF3608 at 469.682 kb on - strand, within GFF3608
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 467,532 + -0.3 467,532 + +0.4 467,532 + +0.4 467,533 - +0.4 467,533 - -0.1 467,580 - -0.7 467,580 - +0.1 467,735 + +0.7 467,817 + GFF3606 0.11 -0.4 467,879 + GFF3606 0.21 -1.7 467,879 + GFF3606 0.21 +0.2 467,944 + GFF3606 0.32 +1.5 467,944 + GFF3606 0.32 -1.6 467,944 + GFF3606 0.32 -0.2 467,971 + GFF3606 0.37 +0.0 467,971 + GFF3606 0.37 -0.5 467,971 + GFF3606 0.37 -0.1 468,097 + GFF3606 0.58 -0.5 468,097 + GFF3606 0.58 +0.4 468,097 + GFF3606 0.58 +0.8 468,098 - GFF3606 0.59 +0.9 468,187 + GFF3606 0.74 -0.1 468,187 + GFF3606 0.74 -0.5 468,187 + GFF3606 0.74 +0.1 468,188 - GFF3606 0.74 -1.1 468,188 - GFF3606 0.74 +0.3 468,188 - GFF3606 0.74 -0.1 468,188 - GFF3606 0.74 -0.8 468,188 - GFF3606 0.74 +0.3 468,188 - GFF3606 0.74 +0.1 468,253 + GFF3606 0.85 -1.7 468,277 + GFF3606 0.89 -2.8 468,277 + GFF3606 0.89 -1.4 468,278 - GFF3606 0.89 +0.4 468,402 + +0.1 468,721 + +1.7 468,721 + +0.2 468,721 + +0.1 468,721 + -1.5 468,721 + -0.8 468,722 - +1.0 468,722 - -0.2 468,722 - +1.1 468,734 + +1.0 468,734 + -3.0 468,734 + -0.1 468,735 - -0.9 468,735 - +0.1 468,735 - +0.2 468,735 - -1.3 468,845 - +1.3 468,845 - +0.7 468,871 + -1.9 468,871 + +1.7 468,871 + +0.3 468,871 + +1.1 468,872 - -0.0 468,961 + +0.3 468,961 + +0.1 468,961 + -0.3 468,961 + +0.7 468,961 + -0.5 468,961 + -1.6 468,962 - -0.3 468,986 + +0.9 469,039 - +0.3 469,039 - -2.1 469,039 - -0.6 469,039 - -0.5 469,221 + +0.7 469,221 + -0.0 469,222 - -0.7 469,222 - -0.0 469,396 + +0.5 469,396 + -0.9 469,396 + -1.9 469,396 + -1.1 469,396 + -1.2 469,397 - +0.8 469,514 - GFF3608 0.28 +0.5 469,557 + GFF3608 0.43 -0.2 469,557 + GFF3608 0.43 -1.2 469,557 + GFF3608 0.43 -0.0 469,557 + GFF3608 0.43 -0.6 469,557 + GFF3608 0.43 +1.0 469,558 - GFF3608 0.43 +0.9 469,558 - GFF3608 0.43 +0.1 469,558 - GFF3608 0.43 +0.4 469,558 - GFF3608 0.43 +0.4 469,558 - GFF3608 0.43 +1.1 469,558 - GFF3608 0.43 -0.7 469,558 - GFF3608 0.43 +0.7 469,558 - GFF3608 0.43 +0.2 469,624 + GFF3608 0.65 +1.1 469,624 + GFF3608 0.65 -1.5 469,624 + GFF3608 0.65 +0.7 469,628 - GFF3608 0.66 +0.0 469,628 - GFF3608 0.66 -1.1 469,628 - GFF3608 0.66 -0.7 469,628 - GFF3608 0.66 +0.9 469,682 - GFF3608 0.84 -0.5
Or see this region's nucleotide sequence