Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3600 and GFF3601 are separated by 337 nucleotides GFF3601 and GFF3602 are separated by 526 nucleotides
GFF3600 - hypothetical protein, at 461,102 to 461,695
GFF3600
GFF3601 - hypothetical protein, at 462,033 to 463,754
GFF3601
GFF3602 - hypothetical protein, at 464,281 to 465,393
GFF3602
Position (kb) 462
463
464 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 461.143 kb on + strand at 461.159 kb on + strand at 461.159 kb on + strand at 461.160 kb on - strand at 461.160 kb on - strand at 461.563 kb on + strand, within GFF3600 at 461.563 kb on + strand, within GFF3600 at 461.564 kb on - strand, within GFF3600 at 461.565 kb on + strand, within GFF3600 at 461.565 kb on + strand, within GFF3600 at 461.565 kb on + strand, within GFF3600 at 461.566 kb on - strand, within GFF3600 at 461.566 kb on - strand, within GFF3600 at 461.612 kb on - strand, within GFF3600 at 461.616 kb on + strand, within GFF3600 at 461.661 kb on + strand at 461.661 kb on + strand at 461.661 kb on + strand at 461.707 kb on + strand at 461.707 kb on + strand at 461.707 kb on + strand at 461.708 kb on - strand at 461.708 kb on - strand at 461.708 kb on - strand at 461.708 kb on - strand at 461.708 kb on - strand at 461.708 kb on - strand at 461.870 kb on - strand at 461.974 kb on + strand at 461.974 kb on + strand at 461.974 kb on + strand at 461.975 kb on - strand at 461.975 kb on - strand at 461.975 kb on - strand at 461.976 kb on + strand at 461.976 kb on + strand at 461.977 kb on - strand at 462.217 kb on + strand, within GFF3601 at 462.217 kb on + strand, within GFF3601 at 462.217 kb on + strand, within GFF3601 at 462.218 kb on - strand, within GFF3601 at 462.218 kb on - strand, within GFF3601 at 462.218 kb on - strand, within GFF3601 at 462.317 kb on + strand, within GFF3601 at 462.317 kb on + strand, within GFF3601 at 462.317 kb on + strand, within GFF3601 at 462.317 kb on + strand, within GFF3601 at 462.318 kb on - strand, within GFF3601 at 462.318 kb on - strand, within GFF3601 at 462.318 kb on - strand, within GFF3601 at 462.331 kb on + strand, within GFF3601 at 462.551 kb on + strand, within GFF3601 at 462.552 kb on - strand, within GFF3601 at 462.647 kb on - strand, within GFF3601 at 462.647 kb on - strand, within GFF3601 at 462.785 kb on + strand, within GFF3601 at 462.787 kb on - strand, within GFF3601 at 462.804 kb on - strand, within GFF3601 at 462.863 kb on + strand, within GFF3601 at 463.148 kb on + strand, within GFF3601 at 463.148 kb on + strand, within GFF3601 at 463.149 kb on - strand, within GFF3601 at 463.149 kb on - strand, within GFF3601 at 463.149 kb on - strand, within GFF3601 at 463.149 kb on - strand, within GFF3601 at 463.172 kb on + strand, within GFF3601 at 463.172 kb on + strand, within GFF3601 at 463.172 kb on + strand, within GFF3601 at 463.172 kb on + strand, within GFF3601 at 463.173 kb on - strand, within GFF3601 at 463.173 kb on - strand, within GFF3601 at 463.173 kb on - strand, within GFF3601 at 463.173 kb on - strand, within GFF3601 at 463.249 kb on + strand, within GFF3601 at 463.254 kb on + strand, within GFF3601 at 463.254 kb on + strand, within GFF3601 at 463.255 kb on - strand, within GFF3601 at 463.255 kb on - strand, within GFF3601 at 463.396 kb on + strand, within GFF3601 at 463.568 kb on - strand, within GFF3601 at 463.568 kb on - strand, within GFF3601 at 463.593 kb on + strand at 463.593 kb on + strand at 463.593 kb on + strand at 463.593 kb on + strand at 463.594 kb on - strand at 463.594 kb on - strand at 463.594 kb on - strand at 463.594 kb on - strand at 463.594 kb on - strand at 463.626 kb on - strand at 463.704 kb on + strand at 463.704 kb on + strand at 463.809 kb on + strand at 463.822 kb on + strand at 463.823 kb on - strand at 463.823 kb on - strand at 463.823 kb on - strand at 463.823 kb on - strand at 463.834 kb on + strand at 463.869 kb on + strand at 463.869 kb on + strand at 463.870 kb on - strand at 463.870 kb on - strand at 463.870 kb on - strand at 463.871 kb on + strand at 463.871 kb on + strand at 463.871 kb on + strand at 463.872 kb on - strand at 463.872 kb on - strand at 463.881 kb on + strand at 463.882 kb on - strand at 463.973 kb on + strand at 463.973 kb on + strand at 463.974 kb on - strand at 463.974 kb on - strand at 464.114 kb on + strand at 464.114 kb on + strand at 464.114 kb on + strand at 464.114 kb on + strand at 464.114 kb on + strand at 464.115 kb on - strand at 464.115 kb on - strand at 464.237 kb on + strand at 464.238 kb on - strand at 464.250 kb on + strand at 464.274 kb on - strand at 464.274 kb on - strand at 464.300 kb on - strand at 464.341 kb on + strand at 464.341 kb on + strand at 464.341 kb on + strand at 464.415 kb on + strand, within GFF3602 at 464.578 kb on + strand, within GFF3602 at 464.631 kb on + strand, within GFF3602
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 461,143 + +0.2 461,159 + -1.1 461,159 + -0.6 461,160 - -1.5 461,160 - +0.5 461,563 + GFF3600 0.78 -0.5 461,563 + GFF3600 0.78 +0.7 461,564 - GFF3600 0.78 -0.5 461,565 + GFF3600 0.78 +0.1 461,565 + GFF3600 0.78 -1.0 461,565 + GFF3600 0.78 -1.6 461,566 - GFF3600 0.78 +0.6 461,566 - GFF3600 0.78 +0.5 461,612 - GFF3600 0.86 -0.9 461,616 + GFF3600 0.87 -0.5 461,661 + +0.2 461,661 + -0.2 461,661 + +1.2 461,707 + -0.0 461,707 + -0.6 461,707 + +1.1 461,708 - +0.8 461,708 - -2.9 461,708 - +1.1 461,708 - -2.3 461,708 - -0.5 461,708 - +0.5 461,870 - +0.7 461,974 + -0.8 461,974 + -0.5 461,974 + -0.3 461,975 - -0.7 461,975 - -1.3 461,975 - +0.7 461,976 + +0.1 461,976 + +0.1 461,977 - -1.3 462,217 + GFF3601 0.11 +0.4 462,217 + GFF3601 0.11 +0.7 462,217 + GFF3601 0.11 +0.5 462,218 - GFF3601 0.11 +0.9 462,218 - GFF3601 0.11 +1.6 462,218 - GFF3601 0.11 +0.3 462,317 + GFF3601 0.16 -0.6 462,317 + GFF3601 0.16 -1.6 462,317 + GFF3601 0.16 -0.1 462,317 + GFF3601 0.16 -0.6 462,318 - GFF3601 0.17 +0.2 462,318 - GFF3601 0.17 -0.2 462,318 - GFF3601 0.17 +1.3 462,331 + GFF3601 0.17 -0.8 462,551 + GFF3601 0.30 +0.1 462,552 - GFF3601 0.30 -0.9 462,647 - GFF3601 0.36 +0.2 462,647 - GFF3601 0.36 -0.1 462,785 + GFF3601 0.44 +2.3 462,787 - GFF3601 0.44 -0.4 462,804 - GFF3601 0.45 -0.3 462,863 + GFF3601 0.48 -0.0 463,148 + GFF3601 0.65 +0.1 463,148 + GFF3601 0.65 -2.1 463,149 - GFF3601 0.65 -0.9 463,149 - GFF3601 0.65 +0.3 463,149 - GFF3601 0.65 -0.2 463,149 - GFF3601 0.65 +0.0 463,172 + GFF3601 0.66 +1.0 463,172 + GFF3601 0.66 -0.0 463,172 + GFF3601 0.66 +0.2 463,172 + GFF3601 0.66 +0.8 463,173 - GFF3601 0.66 -0.0 463,173 - GFF3601 0.66 +1.3 463,173 - GFF3601 0.66 +2.0 463,173 - GFF3601 0.66 +1.2 463,249 + GFF3601 0.71 +0.2 463,254 + GFF3601 0.71 +0.3 463,254 + GFF3601 0.71 -0.7 463,255 - GFF3601 0.71 +0.3 463,255 - GFF3601 0.71 +0.1 463,396 + GFF3601 0.79 -0.0 463,568 - GFF3601 0.89 -0.1 463,568 - GFF3601 0.89 -1.1 463,593 + -2.2 463,593 + +0.7 463,593 + +0.1 463,593 + -1.5 463,594 - -1.0 463,594 - -0.2 463,594 - +0.8 463,594 - -0.0 463,594 - -1.3 463,626 - -2.9 463,704 + -0.8 463,704 + +0.2 463,809 + -0.9 463,822 + -2.8 463,823 - -0.2 463,823 - +0.6 463,823 - -0.4 463,823 - -0.4 463,834 + -0.4 463,869 + -0.2 463,869 + +0.0 463,870 - -0.0 463,870 - +0.0 463,870 - +0.6 463,871 + +1.6 463,871 + +0.4 463,871 + -1.0 463,872 - -0.7 463,872 - +0.1 463,881 + +1.0 463,882 - +0.2 463,973 + +1.1 463,973 + +0.4 463,974 - -1.6 463,974 - -0.1 464,114 + +0.2 464,114 + +0.8 464,114 + +0.6 464,114 + -1.1 464,114 + +2.1 464,115 - -2.6 464,115 - +0.5 464,237 + +0.1 464,238 - +0.3 464,250 + +0.7 464,274 - +0.3 464,274 - -0.3 464,300 - +0.1 464,341 + -0.7 464,341 + +0.1 464,341 + -0.5 464,415 + GFF3602 0.12 -0.1 464,578 + GFF3602 0.27 +0.3 464,631 + GFF3602 0.31 -0.9
Or see this region's nucleotide sequence