Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3598 and GFF3599 are separated by 125 nucleotides GFF3599 and GFF3600 are separated by 425 nucleotides
GFF3598 - Energy-dependent translational throttle protein EttA, at 458,422 to 460,077
GFF3598
GFF3599 - hypothetical protein, at 460,203 to 460,676
GFF3599
GFF3600 - hypothetical protein, at 461,102 to 461,695
GFF3600
Position (kb) 460
461 Strain fitness (log2 ratio) -2
-1
0
1 at 460.177 kb on - strand at 460.428 kb on + strand, within GFF3599 at 460.428 kb on + strand, within GFF3599 at 460.428 kb on + strand, within GFF3599 at 460.429 kb on - strand, within GFF3599 at 460.429 kb on - strand, within GFF3599 at 460.429 kb on - strand, within GFF3599 at 460.521 kb on + strand, within GFF3599 at 460.521 kb on + strand, within GFF3599 at 460.522 kb on - strand, within GFF3599 at 460.522 kb on - strand, within GFF3599 at 460.522 kb on - strand, within GFF3599 at 460.960 kb on + strand at 460.965 kb on + strand at 460.981 kb on + strand at 460.982 kb on - strand at 460.982 kb on - strand at 461.143 kb on + strand at 461.159 kb on + strand at 461.159 kb on + strand at 461.160 kb on - strand at 461.160 kb on - strand at 461.563 kb on + strand, within GFF3600 at 461.563 kb on + strand, within GFF3600 at 461.564 kb on - strand, within GFF3600 at 461.565 kb on + strand, within GFF3600 at 461.565 kb on + strand, within GFF3600 at 461.565 kb on + strand, within GFF3600 at 461.566 kb on - strand, within GFF3600 at 461.566 kb on - strand, within GFF3600 at 461.612 kb on - strand, within GFF3600 at 461.616 kb on + strand, within GFF3600 at 461.661 kb on + strand at 461.661 kb on + strand at 461.661 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 460,177 - -0.6 460,428 + GFF3599 0.47 +1.3 460,428 + GFF3599 0.47 +0.6 460,428 + GFF3599 0.47 -0.4 460,429 - GFF3599 0.48 -0.9 460,429 - GFF3599 0.48 -0.9 460,429 - GFF3599 0.48 +0.2 460,521 + GFF3599 0.67 +0.5 460,521 + GFF3599 0.67 -0.2 460,522 - GFF3599 0.67 -0.8 460,522 - GFF3599 0.67 -0.9 460,522 - GFF3599 0.67 -0.9 460,960 + -0.4 460,965 + -1.9 460,981 + -0.1 460,982 - +0.3 460,982 - +0.4 461,143 + +0.2 461,159 + -1.1 461,159 + -0.6 461,160 - -1.5 461,160 - +0.5 461,563 + GFF3600 0.78 -0.5 461,563 + GFF3600 0.78 +0.7 461,564 - GFF3600 0.78 -0.5 461,565 + GFF3600 0.78 +0.1 461,565 + GFF3600 0.78 -1.0 461,565 + GFF3600 0.78 -1.6 461,566 - GFF3600 0.78 +0.6 461,566 - GFF3600 0.78 +0.5 461,612 - GFF3600 0.86 -0.9 461,616 + GFF3600 0.87 -0.5 461,661 + +0.2 461,661 + -0.2 461,661 + +1.2
Or see this region's nucleotide sequence