Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3514 and GFF3515 are separated by 25 nucleotides GFF3515 and GFF3516 are separated by 3 nucleotides GFF3516 and GFF3517 are separated by 27 nucleotides GFF3517 and GFF3518 are separated by 449 nucleotides
GFF3514 - hypothetical protein, at 366,659 to 367,945
GFF3514
GFF3515 - hypothetical protein, at 367,971 to 368,468
GFF3515
GFF3516 - hypothetical protein, at 368,472 to 368,678
GFF3516
GFF3517 - hypothetical protein, at 368,706 to 368,894
GFF3517
GFF3518 - hypothetical protein, at 369,344 to 370,507
GFF3518
Position (kb) 368
369 Strain fitness (log2 ratio) -2
-1
0
1 at 367.509 kb on + strand, within GFF3514 at 367.521 kb on + strand, within GFF3514 at 367.602 kb on + strand, within GFF3514 at 367.602 kb on + strand, within GFF3514 at 367.602 kb on + strand, within GFF3514 at 367.602 kb on + strand, within GFF3514 at 367.603 kb on - strand, within GFF3514 at 367.603 kb on - strand, within GFF3514 at 367.606 kb on + strand, within GFF3514 at 367.812 kb on + strand, within GFF3514 at 367.812 kb on + strand, within GFF3514 at 367.812 kb on + strand, within GFF3514 at 367.813 kb on - strand, within GFF3514 at 367.956 kb on + strand at 368.317 kb on + strand, within GFF3515 at 368.318 kb on - strand, within GFF3515 at 368.318 kb on - strand, within GFF3515 at 368.318 kb on - strand, within GFF3515 at 368.324 kb on + strand, within GFF3515 at 368.324 kb on + strand, within GFF3515 at 368.324 kb on + strand, within GFF3515 at 368.324 kb on + strand, within GFF3515 at 368.324 kb on + strand, within GFF3515 at 368.324 kb on + strand, within GFF3515 at 368.325 kb on - strand, within GFF3515 at 368.325 kb on - strand, within GFF3515 at 368.422 kb on + strand at 368.422 kb on + strand at 368.423 kb on - strand at 368.889 kb on - strand at 369.333 kb on - strand at 369.345 kb on + strand at 369.588 kb on + strand, within GFF3518 at 369.589 kb on - strand, within GFF3518
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 367,509 + GFF3514 0.66 -0.1 367,521 + GFF3514 0.67 -0.8 367,602 + GFF3514 0.73 +0.5 367,602 + GFF3514 0.73 -0.2 367,602 + GFF3514 0.73 -0.2 367,602 + GFF3514 0.73 +0.0 367,603 - GFF3514 0.73 -1.8 367,603 - GFF3514 0.73 -0.0 367,606 + GFF3514 0.74 -0.3 367,812 + GFF3514 0.90 +1.0 367,812 + GFF3514 0.90 -0.7 367,812 + GFF3514 0.90 +0.1 367,813 - GFF3514 0.90 +0.3 367,956 + -1.1 368,317 + GFF3515 0.69 -0.2 368,318 - GFF3515 0.70 -0.0 368,318 - GFF3515 0.70 +0.5 368,318 - GFF3515 0.70 +0.7 368,324 + GFF3515 0.71 -0.1 368,324 + GFF3515 0.71 -0.3 368,324 + GFF3515 0.71 -1.3 368,324 + GFF3515 0.71 -1.0 368,324 + GFF3515 0.71 -0.3 368,324 + GFF3515 0.71 +0.2 368,325 - GFF3515 0.71 -1.6 368,325 - GFF3515 0.71 -0.3 368,422 + +0.4 368,422 + -1.0 368,423 - +1.5 368,889 - -0.4 369,333 - +0.8 369,345 + -1.2 369,588 + GFF3518 0.21 -0.5 369,589 - GFF3518 0.21 -1.2
Or see this region's nucleotide sequence