Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3494 and GFF3495 are separated by 106 nucleotides GFF3495 and GFF3496 are separated by 14 nucleotides GFF3496 and GFF3497 are separated by 22 nucleotides GFF3497 and GFF3498 are separated by 29 nucleotides
GFF3494 - hypothetical protein, at 349,385 to 350,788
GFF3494
GFF3495 - hypothetical protein, at 350,895 to 351,038
GFF3495
GFF3496 - hypothetical protein, at 351,053 to 351,373
GFF3496
GFF3497 - hypothetical protein, at 351,396 to 352,097
GFF3497
GFF3498 - hypothetical protein, at 352,127 to 356,026
GFF3498
Position (kb) 351
352 Strain fitness (log2 ratio) -1
0
1
2 at 350.064 kb on + strand, within GFF3494 at 350.064 kb on + strand, within GFF3494 at 350.065 kb on - strand, within GFF3494 at 350.065 kb on - strand, within GFF3494 at 350.139 kb on + strand, within GFF3494 at 350.143 kb on - strand, within GFF3494 at 350.199 kb on + strand, within GFF3494 at 350.200 kb on - strand, within GFF3494 at 350.361 kb on + strand, within GFF3494 at 350.361 kb on + strand, within GFF3494 at 350.362 kb on - strand, within GFF3494 at 350.362 kb on - strand, within GFF3494 at 350.610 kb on + strand, within GFF3494 at 350.610 kb on + strand, within GFF3494 at 350.610 kb on + strand, within GFF3494 at 350.611 kb on - strand, within GFF3494 at 350.611 kb on - strand, within GFF3494 at 350.611 kb on - strand, within GFF3494 at 350.611 kb on - strand, within GFF3494 at 351.072 kb on + strand at 351.073 kb on - strand at 351.366 kb on + strand at 351.367 kb on - strand at 351.598 kb on + strand, within GFF3497 at 351.688 kb on + strand, within GFF3497 at 351.689 kb on - strand, within GFF3497 at 352.128 kb on + strand at 352.128 kb on + strand at 352.129 kb on - strand at 352.248 kb on + strand at 352.248 kb on + strand at 352.317 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 350,064 + GFF3494 0.48 -1.5 350,064 + GFF3494 0.48 -0.4 350,065 - GFF3494 0.48 +0.8 350,065 - GFF3494 0.48 -0.3 350,139 + GFF3494 0.54 +0.2 350,143 - GFF3494 0.54 +0.7 350,199 + GFF3494 0.58 -1.3 350,200 - GFF3494 0.58 -0.8 350,361 + GFF3494 0.70 +0.8 350,361 + GFF3494 0.70 +1.4 350,362 - GFF3494 0.70 -0.0 350,362 - GFF3494 0.70 -0.6 350,610 + GFF3494 0.87 -0.7 350,610 + GFF3494 0.87 +0.1 350,610 + GFF3494 0.87 -1.3 350,611 - GFF3494 0.87 -0.4 350,611 - GFF3494 0.87 -0.6 350,611 - GFF3494 0.87 +0.2 350,611 - GFF3494 0.87 -0.5 351,072 + +0.6 351,073 - +1.3 351,366 + -1.2 351,367 - -0.8 351,598 + GFF3497 0.29 +0.9 351,688 + GFF3497 0.42 +1.3 351,689 - GFF3497 0.42 +1.9 352,128 + -1.0 352,128 + +0.4 352,129 - -0.2 352,248 + +0.7 352,248 + +0.1 352,317 + -0.5
Or see this region's nucleotide sequence