Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3450 and GFF3451 are separated by 8 nucleotides GFF3451 and GFF3452 overlap by 4 nucleotides GFF3452 and GFF3453 are separated by 279 nucleotides
GFF3450 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 300,793 to 301,548
GFF3450
GFF3451 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 301,557 to 302,318
GFF3451
GFF3452 - Phthiocerol synthesis polyketide synthase type I PpsC, at 302,315 to 303,319
GFF3452
GFF3453 - Leu/Ile/Val-binding protein, at 303,599 to 304,828
GFF3453
Position (kb) 302
303
304 Strain fitness (log2 ratio) -1
0
1 at 301.840 kb on + strand, within GFF3451 at 301.841 kb on - strand, within GFF3451 at 301.864 kb on + strand, within GFF3451 at 301.864 kb on + strand, within GFF3451 at 301.865 kb on - strand, within GFF3451 at 301.865 kb on - strand, within GFF3451 at 301.865 kb on - strand, within GFF3451 at 302.128 kb on + strand, within GFF3451 at 302.224 kb on + strand, within GFF3451 at 302.224 kb on + strand, within GFF3451 at 302.224 kb on + strand, within GFF3451 at 302.224 kb on + strand, within GFF3451 at 302.225 kb on - strand, within GFF3451 at 302.225 kb on - strand, within GFF3451 at 302.640 kb on + strand, within GFF3452 at 302.641 kb on - strand, within GFF3452 at 302.728 kb on - strand, within GFF3452 at 302.925 kb on + strand, within GFF3452 at 302.925 kb on + strand, within GFF3452 at 302.926 kb on - strand, within GFF3452 at 302.928 kb on + strand, within GFF3452 at 302.929 kb on - strand, within GFF3452 at 302.929 kb on - strand, within GFF3452 at 303.009 kb on + strand, within GFF3452 at 303.010 kb on - strand, within GFF3452 at 303.019 kb on - strand, within GFF3452 at 303.019 kb on - strand, within GFF3452 at 303.147 kb on + strand, within GFF3452 at 303.147 kb on + strand, within GFF3452 at 303.148 kb on - strand, within GFF3452 at 303.148 kb on - strand, within GFF3452 at 303.148 kb on - strand, within GFF3452 at 303.148 kb on - strand, within GFF3452 at 303.364 kb on - strand at 303.442 kb on + strand at 303.443 kb on - strand at 303.443 kb on - strand at 303.443 kb on - strand at 303.443 kb on - strand at 303.443 kb on - strand at 303.479 kb on - strand at 303.634 kb on + strand at 303.634 kb on + strand at 303.707 kb on + strand at 303.708 kb on - strand at 303.911 kb on + strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.912 kb on - strand, within GFF3453 at 303.969 kb on - strand, within GFF3453 at 304.019 kb on + strand, within GFF3453 at 304.019 kb on + strand, within GFF3453 at 304.019 kb on + strand, within GFF3453 at 304.020 kb on - strand, within GFF3453 at 304.020 kb on - strand, within GFF3453 at 304.020 kb on - strand, within GFF3453 at 304.020 kb on - strand, within GFF3453 at 304.230 kb on - strand, within GFF3453
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 301,840 + GFF3451 0.37 -1.4 301,841 - GFF3451 0.37 +0.2 301,864 + GFF3451 0.40 -1.1 301,864 + GFF3451 0.40 -0.5 301,865 - GFF3451 0.40 -0.4 301,865 - GFF3451 0.40 -0.0 301,865 - GFF3451 0.40 +0.9 302,128 + GFF3451 0.75 +0.3 302,224 + GFF3451 0.88 +0.2 302,224 + GFF3451 0.88 +1.0 302,224 + GFF3451 0.88 -1.3 302,224 + GFF3451 0.88 -1.0 302,225 - GFF3451 0.88 -0.5 302,225 - GFF3451 0.88 -0.3 302,640 + GFF3452 0.32 -0.9 302,641 - GFF3452 0.32 -0.3 302,728 - GFF3452 0.41 -0.8 302,925 + GFF3452 0.61 +0.1 302,925 + GFF3452 0.61 -0.2 302,926 - GFF3452 0.61 +0.2 302,928 + GFF3452 0.61 +0.4 302,929 - GFF3452 0.61 -0.9 302,929 - GFF3452 0.61 -0.4 303,009 + GFF3452 0.69 -0.3 303,010 - GFF3452 0.69 -0.7 303,019 - GFF3452 0.70 +0.5 303,019 - GFF3452 0.70 -0.3 303,147 + GFF3452 0.83 -0.1 303,147 + GFF3452 0.83 -1.3 303,148 - GFF3452 0.83 -0.5 303,148 - GFF3452 0.83 +0.3 303,148 - GFF3452 0.83 +0.7 303,148 - GFF3452 0.83 -0.5 303,364 - -1.1 303,442 + -0.5 303,443 - -0.6 303,443 - +0.2 303,443 - -0.0 303,443 - -1.7 303,443 - -0.4 303,479 - -0.2 303,634 + -0.8 303,634 + +0.1 303,707 + -0.0 303,708 - +0.5 303,911 + GFF3453 0.25 -0.1 303,912 - GFF3453 0.25 +0.8 303,912 - GFF3453 0.25 -1.4 303,912 - GFF3453 0.25 -0.2 303,912 - GFF3453 0.25 +1.6 303,912 - GFF3453 0.25 +0.3 303,912 - GFF3453 0.25 +1.6 303,912 - GFF3453 0.25 -1.2 303,969 - GFF3453 0.30 +0.2 304,019 + GFF3453 0.34 -0.3 304,019 + GFF3453 0.34 -0.5 304,019 + GFF3453 0.34 -0.2 304,020 - GFF3453 0.34 -0.7 304,020 - GFF3453 0.34 +0.3 304,020 - GFF3453 0.34 +0.5 304,020 - GFF3453 0.34 +1.3 304,230 - GFF3453 0.51 -0.3
Or see this region's nucleotide sequence