Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3408 and GFF3409 overlap by 4 nucleotides GFF3409 and GFF3410 are separated by 16 nucleotides GFF3410 and GFF3411 are separated by 52 nucleotides
GFF3408 - Putative aliphatic sulfonates transport permease protein SsuC, at 253,155 to 254,030
GFF3408
GFF3409 - Aliphatic sulfonates import ATP-binding protein SsuB, at 254,027 to 254,728
GFF3409
GFF3410 - Putative aliphatic sulfonates-binding protein, at 254,745 to 255,737
GFF3410
GFF3411 - putative FMNH2-dependent monooxygenase SfnC, at 255,790 to 257,019
GFF3411
Position (kb) 254
255
256 Strain fitness (log2 ratio) -2
-1
0
1 at 253.935 kb on + strand, within GFF3408 at 253.935 kb on + strand, within GFF3408 at 253.935 kb on + strand, within GFF3408 at 253.936 kb on - strand, within GFF3408 at 254.883 kb on + strand, within GFF3410 at 254.883 kb on + strand, within GFF3410 at 254.884 kb on - strand, within GFF3410 at 254.884 kb on - strand, within GFF3410 at 254.884 kb on - strand, within GFF3410 at 255.273 kb on + strand, within GFF3410 at 255.274 kb on - strand, within GFF3410 at 255.274 kb on - strand, within GFF3410 at 255.370 kb on - strand, within GFF3410 at 255.495 kb on + strand, within GFF3410 at 255.495 kb on + strand, within GFF3410 at 255.612 kb on + strand, within GFF3410 at 255.612 kb on + strand, within GFF3410 at 255.613 kb on - strand, within GFF3410 at 255.784 kb on + strand at 255.785 kb on - strand at 255.785 kb on - strand at 255.785 kb on - strand at 255.785 kb on - strand at 255.785 kb on - strand at 255.785 kb on - strand at 256.018 kb on + strand, within GFF3411 at 256.018 kb on + strand, within GFF3411 at 256.019 kb on - strand, within GFF3411 at 256.100 kb on - strand, within GFF3411 at 256.100 kb on - strand, within GFF3411 at 256.100 kb on - strand, within GFF3411 at 256.114 kb on + strand, within GFF3411 at 256.115 kb on - strand, within GFF3411 at 256.115 kb on - strand, within GFF3411 at 256.270 kb on + strand, within GFF3411 at 256.270 kb on + strand, within GFF3411 at 256.270 kb on + strand, within GFF3411 at 256.271 kb on - strand, within GFF3411 at 256.271 kb on - strand, within GFF3411 at 256.273 kb on + strand, within GFF3411 at 256.273 kb on + strand, within GFF3411 at 256.274 kb on - strand, within GFF3411 at 256.274 kb on - strand, within GFF3411 at 256.492 kb on + strand, within GFF3411 at 256.504 kb on + strand, within GFF3411 at 256.612 kb on + strand, within GFF3411 at 256.612 kb on + strand, within GFF3411 at 256.612 kb on + strand, within GFF3411 at 256.612 kb on + strand, within GFF3411 at 256.615 kb on + strand, within GFF3411 at 256.616 kb on - strand, within GFF3411
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 253,935 + GFF3408 0.89 -1.8 253,935 + GFF3408 0.89 +0.0 253,935 + GFF3408 0.89 -0.1 253,936 - GFF3408 0.89 -0.9 254,883 + GFF3410 0.14 +0.4 254,883 + GFF3410 0.14 +0.0 254,884 - GFF3410 0.14 -0.2 254,884 - GFF3410 0.14 -1.4 254,884 - GFF3410 0.14 +0.3 255,273 + GFF3410 0.53 -1.0 255,274 - GFF3410 0.53 -1.2 255,274 - GFF3410 0.53 +0.8 255,370 - GFF3410 0.63 -0.3 255,495 + GFF3410 0.76 -1.7 255,495 + GFF3410 0.76 -1.3 255,612 + GFF3410 0.87 -0.7 255,612 + GFF3410 0.87 +1.6 255,613 - GFF3410 0.87 +0.5 255,784 + +0.2 255,785 - +0.4 255,785 - +0.0 255,785 - -0.1 255,785 - -1.1 255,785 - +1.1 255,785 - +0.5 256,018 + GFF3411 0.19 +0.0 256,018 + GFF3411 0.19 +0.7 256,019 - GFF3411 0.19 +0.5 256,100 - GFF3411 0.25 -1.4 256,100 - GFF3411 0.25 -0.4 256,100 - GFF3411 0.25 -1.1 256,114 + GFF3411 0.26 -1.8 256,115 - GFF3411 0.26 -0.3 256,115 - GFF3411 0.26 -1.1 256,270 + GFF3411 0.39 +0.2 256,270 + GFF3411 0.39 +0.2 256,270 + GFF3411 0.39 +1.7 256,271 - GFF3411 0.39 -0.5 256,271 - GFF3411 0.39 +0.3 256,273 + GFF3411 0.39 +0.1 256,273 + GFF3411 0.39 -0.5 256,274 - GFF3411 0.39 -0.5 256,274 - GFF3411 0.39 -1.2 256,492 + GFF3411 0.57 -0.9 256,504 + GFF3411 0.58 +1.3 256,612 + GFF3411 0.67 -0.1 256,612 + GFF3411 0.67 +0.4 256,612 + GFF3411 0.67 +0.6 256,612 + GFF3411 0.67 -1.3 256,615 + GFF3411 0.67 -1.2 256,616 - GFF3411 0.67 -0.4
Or see this region's nucleotide sequence