Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3405 and GFF3406 are separated by 35 nucleotides GFF3406 and GFF3407 are separated by 310 nucleotides
GFF3405 - putative FMNH2-dependent monooxygenase SfnC, at 249,653 to 250,864
GFF3405
GFF3406 - D-methionine-binding lipoprotein MetQ, at 250,900 to 251,727
GFF3406
GFF3407 - FMNH(2)-dependent dimethylsulfone monooxygenase, at 252,038 to 253,120
GFF3407
Position (kb) 250
251
252 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 250.002 kb on + strand, within GFF3405 at 250.003 kb on - strand, within GFF3405 at 250.017 kb on + strand, within GFF3405 at 250.017 kb on + strand, within GFF3405 at 250.017 kb on + strand, within GFF3405 at 250.018 kb on - strand, within GFF3405 at 250.018 kb on - strand, within GFF3405 at 250.081 kb on - strand, within GFF3405 at 250.081 kb on - strand, within GFF3405 at 250.123 kb on - strand, within GFF3405 at 250.223 kb on - strand, within GFF3405 at 250.416 kb on + strand, within GFF3405 at 250.417 kb on - strand, within GFF3405 at 250.564 kb on - strand, within GFF3405 at 250.564 kb on - strand, within GFF3405 at 250.569 kb on + strand, within GFF3405 at 250.569 kb on + strand, within GFF3405 at 251.039 kb on + strand, within GFF3406 at 251.039 kb on + strand, within GFF3406 at 251.039 kb on + strand, within GFF3406 at 251.105 kb on + strand, within GFF3406 at 251.106 kb on - strand, within GFF3406 at 251.106 kb on - strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.111 kb on + strand, within GFF3406 at 251.112 kb on - strand, within GFF3406 at 251.112 kb on - strand, within GFF3406 at 251.112 kb on - strand, within GFF3406 at 251.112 kb on - strand, within GFF3406 at 251.229 kb on - strand, within GFF3406 at 251.358 kb on - strand, within GFF3406 at 251.358 kb on - strand, within GFF3406 at 251.369 kb on + strand, within GFF3406 at 251.370 kb on - strand, within GFF3406 at 251.999 kb on + strand at 252.000 kb on - strand at 252.000 kb on - strand at 252.173 kb on + strand, within GFF3407 at 252.308 kb on + strand, within GFF3407 at 252.308 kb on + strand, within GFF3407 at 252.309 kb on - strand, within GFF3407 at 252.309 kb on - strand, within GFF3407 at 252.309 kb on - strand, within GFF3407 at 252.309 kb on - strand, within GFF3407 at 252.315 kb on - strand, within GFF3407 at 252.456 kb on - strand, within GFF3407 at 252.456 kb on - strand, within GFF3407 at 252.461 kb on + strand, within GFF3407 at 252.462 kb on - strand, within GFF3407 at 252.593 kb on + strand, within GFF3407 at 252.650 kb on + strand, within GFF3407 at 252.651 kb on - strand, within GFF3407 at 252.651 kb on - strand, within GFF3407 at 252.651 kb on - strand, within GFF3407 at 252.681 kb on + strand, within GFF3407 at 252.681 kb on + strand, within GFF3407 at 252.682 kb on - strand, within GFF3407
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 250,002 + GFF3405 0.29 +0.1 250,003 - GFF3405 0.29 +0.2 250,017 + GFF3405 0.30 +0.2 250,017 + GFF3405 0.30 -1.6 250,017 + GFF3405 0.30 +0.2 250,018 - GFF3405 0.30 -0.8 250,018 - GFF3405 0.30 +0.1 250,081 - GFF3405 0.35 +0.3 250,081 - GFF3405 0.35 -0.5 250,123 - GFF3405 0.39 +1.0 250,223 - GFF3405 0.47 +0.5 250,416 + GFF3405 0.63 -0.2 250,417 - GFF3405 0.63 -0.3 250,564 - GFF3405 0.75 +1.2 250,564 - GFF3405 0.75 -0.3 250,569 + GFF3405 0.76 -0.3 250,569 + GFF3405 0.76 -3.0 251,039 + GFF3406 0.17 -0.9 251,039 + GFF3406 0.17 -0.1 251,039 + GFF3406 0.17 +0.1 251,105 + GFF3406 0.25 -1.6 251,106 - GFF3406 0.25 -0.2 251,106 - GFF3406 0.25 -0.6 251,111 + GFF3406 0.25 +0.3 251,111 + GFF3406 0.25 +0.4 251,111 + GFF3406 0.25 -1.7 251,111 + GFF3406 0.25 +0.9 251,111 + GFF3406 0.25 +0.1 251,111 + GFF3406 0.25 -0.1 251,111 + GFF3406 0.25 -0.3 251,112 - GFF3406 0.26 +0.8 251,112 - GFF3406 0.26 -1.1 251,112 - GFF3406 0.26 -0.8 251,112 - GFF3406 0.26 -0.6 251,229 - GFF3406 0.40 -0.3 251,358 - GFF3406 0.55 -0.5 251,358 - GFF3406 0.55 -0.2 251,369 + GFF3406 0.57 +1.3 251,370 - GFF3406 0.57 -0.8 251,999 + -0.8 252,000 - +0.6 252,000 - -1.7 252,173 + GFF3407 0.12 +1.3 252,308 + GFF3407 0.25 +0.2 252,308 + GFF3407 0.25 +0.2 252,309 - GFF3407 0.25 +0.5 252,309 - GFF3407 0.25 -0.6 252,309 - GFF3407 0.25 -0.1 252,309 - GFF3407 0.25 -0.5 252,315 - GFF3407 0.26 +0.2 252,456 - GFF3407 0.39 -0.5 252,456 - GFF3407 0.39 +0.9 252,461 + GFF3407 0.39 +1.5 252,462 - GFF3407 0.39 -0.4 252,593 + GFF3407 0.51 +0.4 252,650 + GFF3407 0.57 +0.1 252,651 - GFF3407 0.57 +0.2 252,651 - GFF3407 0.57 -0.7 252,651 - GFF3407 0.57 -0.3 252,681 + GFF3407 0.59 -0.1 252,681 + GFF3407 0.59 -0.1 252,682 - GFF3407 0.59 -0.1
Or see this region's nucleotide sequence