Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF335 and GFF336 are separated by 33 nucleotides GFF336 and GFF337 are separated by 10 nucleotides GFF337 and GFF338 overlap by 59 nucleotides GFF338 and GFF339 overlap by 4 nucleotides GFF339 and GFF340 are separated by 83 nucleotides
GFF335 - hypothetical protein, at 343,539 to 344,249
GFF335
GFF336 - hypothetical protein, at 344,283 to 344,540
GFF336
GFF337 - hypothetical protein, at 344,551 to 344,697
GFF337
GFF338 - hypothetical protein, at 344,639 to 345,292
GFF338
GFF339 - hypothetical protein, at 345,289 to 345,777
GFF339
GFF340 - hypothetical protein, at 345,861 to 346,739
GFF340
Position (kb) 344
345
346 Strain fitness (log2 ratio) -2
-1
0
1
2 at 343.650 kb on + strand, within GFF335 at 343.650 kb on + strand, within GFF335 at 343.650 kb on + strand, within GFF335 at 343.651 kb on - strand, within GFF335 at 343.651 kb on - strand, within GFF335 at 343.728 kb on + strand, within GFF335 at 343.728 kb on + strand, within GFF335 at 343.728 kb on + strand, within GFF335 at 343.728 kb on + strand, within GFF335 at 343.729 kb on - strand, within GFF335 at 343.729 kb on - strand, within GFF335 at 343.771 kb on + strand, within GFF335 at 343.804 kb on - strand, within GFF335 at 343.804 kb on - strand, within GFF335 at 343.920 kb on + strand, within GFF335 at 343.920 kb on + strand, within GFF335 at 343.920 kb on + strand, within GFF335 at 343.920 kb on + strand, within GFF335 at 343.920 kb on + strand, within GFF335 at 343.921 kb on - strand, within GFF335 at 343.921 kb on - strand, within GFF335 at 343.921 kb on - strand, within GFF335 at 343.921 kb on - strand, within GFF335 at 344.066 kb on + strand, within GFF335 at 344.067 kb on - strand, within GFF335 at 344.067 kb on - strand, within GFF335 at 344.140 kb on - strand, within GFF335 at 344.140 kb on - strand, within GFF335 at 344.375 kb on + strand, within GFF336 at 344.678 kb on - strand at 344.682 kb on + strand at 344.683 kb on - strand at 345.267 kb on + strand at 345.489 kb on - strand, within GFF339 at 345.589 kb on + strand, within GFF339 at 345.918 kb on + strand at 345.978 kb on + strand, within GFF340 at 345.978 kb on + strand, within GFF340 at 345.978 kb on + strand, within GFF340 at 345.979 kb on - strand, within GFF340 at 345.987 kb on + strand, within GFF340 at 346.056 kb on + strand, within GFF340 at 346.056 kb on + strand, within GFF340 at 346.056 kb on + strand, within GFF340 at 346.056 kb on + strand, within GFF340 at 346.057 kb on - strand, within GFF340 at 346.057 kb on - strand, within GFF340 at 346.069 kb on - strand, within GFF340 at 346.113 kb on + strand, within GFF340 at 346.113 kb on + strand, within GFF340 at 346.113 kb on + strand, within GFF340 at 346.114 kb on - strand, within GFF340 at 346.114 kb on - strand, within GFF340 at 346.267 kb on + strand, within GFF340 at 346.267 kb on + strand, within GFF340 at 346.267 kb on + strand, within GFF340 at 346.268 kb on - strand, within GFF340 at 346.268 kb on - strand, within GFF340 at 346.268 kb on - strand, within GFF340
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 343,650 + GFF335 0.16 +1.1 343,650 + GFF335 0.16 -0.3 343,650 + GFF335 0.16 +0.1 343,651 - GFF335 0.16 +0.9 343,651 - GFF335 0.16 +0.4 343,728 + GFF335 0.27 +0.2 343,728 + GFF335 0.27 +0.3 343,728 + GFF335 0.27 +0.6 343,728 + GFF335 0.27 +0.1 343,729 - GFF335 0.27 +0.8 343,729 - GFF335 0.27 +0.3 343,771 + GFF335 0.33 +0.3 343,804 - GFF335 0.37 +0.4 343,804 - GFF335 0.37 +0.2 343,920 + GFF335 0.54 -1.2 343,920 + GFF335 0.54 +0.2 343,920 + GFF335 0.54 -0.1 343,920 + GFF335 0.54 +0.6 343,920 + GFF335 0.54 +1.3 343,921 - GFF335 0.54 +0.1 343,921 - GFF335 0.54 +0.1 343,921 - GFF335 0.54 +0.9 343,921 - GFF335 0.54 -0.2 344,066 + GFF335 0.74 -1.0 344,067 - GFF335 0.74 +1.3 344,067 - GFF335 0.74 -0.1 344,140 - GFF335 0.85 +0.6 344,140 - GFF335 0.85 -0.9 344,375 + GFF336 0.36 +0.9 344,678 - -0.0 344,682 + -0.9 344,683 - -1.4 345,267 + -1.9 345,489 - GFF339 0.41 +0.5 345,589 + GFF339 0.61 +0.2 345,918 + -0.5 345,978 + GFF340 0.13 +0.9 345,978 + GFF340 0.13 -0.2 345,978 + GFF340 0.13 -0.3 345,979 - GFF340 0.13 -0.3 345,987 + GFF340 0.14 -1.4 346,056 + GFF340 0.22 +0.3 346,056 + GFF340 0.22 -1.1 346,056 + GFF340 0.22 +0.8 346,056 + GFF340 0.22 -1.7 346,057 - GFF340 0.22 +0.2 346,057 - GFF340 0.22 +1.6 346,069 - GFF340 0.24 -0.3 346,113 + GFF340 0.29 +1.4 346,113 + GFF340 0.29 +0.6 346,113 + GFF340 0.29 +0.3 346,114 - GFF340 0.29 +1.1 346,114 - GFF340 0.29 -0.6 346,267 + GFF340 0.46 +1.9 346,267 + GFF340 0.46 -0.4 346,267 + GFF340 0.46 -0.4 346,268 - GFF340 0.46 -0.9 346,268 - GFF340 0.46 -1.0 346,268 - GFF340 0.46 -0.0
Or see this region's nucleotide sequence