Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3326 and GFF3327 overlap by 4 nucleotides GFF3327 and GFF3328 are separated by 40 nucleotides GFF3328 and GFF3329 are separated by 1 nucleotides GFF3329 and GFF3330 overlap by 4 nucleotides
GFF3326 - Putative aliphatic sulfonates transport permease protein SsuC, at 166,502 to 167,308
GFF3326
GFF3327 - Vitamin B12 import ATP-binding protein BtuD, at 167,305 to 168,117
GFF3327
GFF3328 - hypothetical protein, at 168,158 to 169,123
GFF3328
GFF3329 - Riboflavin transport system permease protein RibX, at 169,125 to 169,946
GFF3329
GFF3330 - Bicarbonate transport ATP-binding protein CmpD, at 169,943 to 170,722
GFF3330
Position (kb) 168
169
170 Strain fitness (log2 ratio) -2
-1
0
1 at 168.333 kb on + strand, within GFF3328 at 168.334 kb on - strand, within GFF3328 at 168.378 kb on + strand, within GFF3328 at 168.378 kb on + strand, within GFF3328 at 168.379 kb on - strand, within GFF3328 at 168.379 kb on - strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.505 kb on - strand, within GFF3328 at 168.597 kb on + strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.603 kb on + strand, within GFF3328 at 168.603 kb on + strand, within GFF3328 at 168.604 kb on - strand, within GFF3328 at 168.604 kb on - strand, within GFF3328 at 168.841 kb on - strand, within GFF3328 at 169.599 kb on + strand, within GFF3329 at 169.625 kb on + strand, within GFF3329 at 169.626 kb on - strand, within GFF3329 at 169.626 kb on - strand, within GFF3329 at 169.626 kb on - strand, within GFF3329 at 169.627 kb on + strand, within GFF3329 at 169.627 kb on + strand, within GFF3329 at 169.628 kb on - strand, within GFF3329 at 169.628 kb on - strand, within GFF3329 at 169.644 kb on - strand, within GFF3329 at 169.720 kb on + strand, within GFF3329 at 169.720 kb on + strand, within GFF3329 at 169.720 kb on + strand, within GFF3329 at 169.750 kb on + strand, within GFF3329 at 169.751 kb on - strand, within GFF3329 at 169.751 kb on - strand, within GFF3329 at 169.825 kb on + strand, within GFF3329 at 169.825 kb on + strand, within GFF3329 at 169.825 kb on + strand, within GFF3329 at 169.826 kb on - strand, within GFF3329 at 169.826 kb on - strand, within GFF3329 at 169.826 kb on - strand, within GFF3329 at 169.826 kb on - strand, within GFF3329 at 170.004 kb on + strand at 170.004 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 168,333 + GFF3328 0.18 -1.7 168,334 - GFF3328 0.18 -2.0 168,378 + GFF3328 0.23 -0.8 168,378 + GFF3328 0.23 -1.4 168,379 - GFF3328 0.23 -1.1 168,379 - GFF3328 0.23 +0.5 168,423 + GFF3328 0.27 +1.0 168,423 + GFF3328 0.27 -1.0 168,423 + GFF3328 0.27 -1.4 168,423 + GFF3328 0.27 -1.0 168,423 + GFF3328 0.27 +0.2 168,505 - GFF3328 0.36 +0.5 168,597 + GFF3328 0.45 -0.2 168,598 - GFF3328 0.46 -0.0 168,598 - GFF3328 0.46 -0.5 168,598 - GFF3328 0.46 +0.3 168,598 - GFF3328 0.46 +1.5 168,598 - GFF3328 0.46 +0.1 168,603 + GFF3328 0.46 +0.1 168,603 + GFF3328 0.46 +0.3 168,604 - GFF3328 0.46 -0.1 168,604 - GFF3328 0.46 +0.6 168,841 - GFF3328 0.71 +0.7 169,599 + GFF3329 0.58 +1.7 169,625 + GFF3329 0.61 +0.4 169,626 - GFF3329 0.61 -1.2 169,626 - GFF3329 0.61 +0.1 169,626 - GFF3329 0.61 -2.1 169,627 + GFF3329 0.61 -0.3 169,627 + GFF3329 0.61 -1.6 169,628 - GFF3329 0.61 -0.0 169,628 - GFF3329 0.61 -1.0 169,644 - GFF3329 0.63 -1.6 169,720 + GFF3329 0.72 -0.8 169,720 + GFF3329 0.72 +0.9 169,720 + GFF3329 0.72 +0.9 169,750 + GFF3329 0.76 -0.2 169,751 - GFF3329 0.76 -0.9 169,751 - GFF3329 0.76 -0.7 169,825 + GFF3329 0.85 -0.0 169,825 + GFF3329 0.85 -0.3 169,825 + GFF3329 0.85 -1.4 169,826 - GFF3329 0.85 -0.6 169,826 - GFF3329 0.85 +0.7 169,826 - GFF3329 0.85 -0.2 169,826 - GFF3329 0.85 +1.1 170,004 + -0.0 170,004 + +0.3
Or see this region's nucleotide sequence