Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3325 and GFF3326 overlap by 4 nucleotides GFF3326 and GFF3327 overlap by 4 nucleotides GFF3327 and GFF3328 are separated by 40 nucleotides
GFF3325 - L-hydantoinase, at 165,099 to 166,505
GFF3325
GFF3326 - Putative aliphatic sulfonates transport permease protein SsuC, at 166,502 to 167,308
GFF3326
GFF3327 - Vitamin B12 import ATP-binding protein BtuD, at 167,305 to 168,117
GFF3327
GFF3328 - hypothetical protein, at 168,158 to 169,123
GFF3328
Position (kb) 167
168
169 Strain fitness (log2 ratio) -2
-1
0
1 at 166.308 kb on + strand, within GFF3325 at 166.356 kb on + strand, within GFF3325 at 166.416 kb on + strand at 166.416 kb on + strand at 166.416 kb on + strand at 166.416 kb on + strand at 166.416 kb on + strand at 166.417 kb on - strand at 166.417 kb on - strand at 166.417 kb on - strand at 166.417 kb on - strand at 166.417 kb on - strand at 166.417 kb on - strand at 166.535 kb on + strand at 166.631 kb on + strand, within GFF3326 at 166.632 kb on - strand, within GFF3326 at 166.632 kb on - strand, within GFF3326 at 166.632 kb on - strand, within GFF3326 at 166.632 kb on - strand, within GFF3326 at 168.333 kb on + strand, within GFF3328 at 168.334 kb on - strand, within GFF3328 at 168.378 kb on + strand, within GFF3328 at 168.378 kb on + strand, within GFF3328 at 168.379 kb on - strand, within GFF3328 at 168.379 kb on - strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.423 kb on + strand, within GFF3328 at 168.505 kb on - strand, within GFF3328 at 168.597 kb on + strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.598 kb on - strand, within GFF3328 at 168.603 kb on + strand, within GFF3328 at 168.603 kb on + strand, within GFF3328 at 168.604 kb on - strand, within GFF3328 at 168.604 kb on - strand, within GFF3328 at 168.841 kb on - strand, within GFF3328
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 166,308 + GFF3325 0.86 -0.7 166,356 + GFF3325 0.89 -1.4 166,416 + -0.7 166,416 + -1.9 166,416 + -1.0 166,416 + +0.1 166,416 + +0.6 166,417 - -0.7 166,417 - -0.5 166,417 - +0.6 166,417 - -1.5 166,417 - -0.5 166,417 - +0.6 166,535 + -0.0 166,631 + GFF3326 0.16 -0.9 166,632 - GFF3326 0.16 +0.3 166,632 - GFF3326 0.16 +0.1 166,632 - GFF3326 0.16 -1.0 166,632 - GFF3326 0.16 +0.4 168,333 + GFF3328 0.18 -1.7 168,334 - GFF3328 0.18 -2.0 168,378 + GFF3328 0.23 -0.8 168,378 + GFF3328 0.23 -1.4 168,379 - GFF3328 0.23 -1.1 168,379 - GFF3328 0.23 +0.5 168,423 + GFF3328 0.27 +1.0 168,423 + GFF3328 0.27 -1.0 168,423 + GFF3328 0.27 -1.4 168,423 + GFF3328 0.27 -1.0 168,423 + GFF3328 0.27 +0.2 168,505 - GFF3328 0.36 +0.5 168,597 + GFF3328 0.45 -0.2 168,598 - GFF3328 0.46 -0.0 168,598 - GFF3328 0.46 -0.5 168,598 - GFF3328 0.46 +0.3 168,598 - GFF3328 0.46 +1.5 168,598 - GFF3328 0.46 +0.1 168,603 + GFF3328 0.46 +0.1 168,603 + GFF3328 0.46 +0.3 168,604 - GFF3328 0.46 -0.1 168,604 - GFF3328 0.46 +0.6 168,841 - GFF3328 0.71 +0.7
Or see this region's nucleotide sequence