Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3294 and GFF3295 are separated by 27 nucleotides GFF3295 and GFF3296 are separated by 85 nucleotides
GFF3294 - Proline/betaine transporter, at 130,742 to 132,049
GFF3294
GFF3295 - Proline/betaine transporter, at 132,077 to 133,405
GFF3295
GFF3296 - Glycine--tRNA ligase alpha subunit, at 133,491 to 134,423
GFF3296
Position (kb) 132
133
134 Strain fitness (log2 ratio) -2
-1
0
1
2 at 131.126 kb on - strand, within GFF3294 at 131.262 kb on + strand, within GFF3294 at 131.286 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.517 kb on - strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.611 kb on - strand, within GFF3294 at 131.611 kb on - strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.689 kb on - strand, within GFF3294 at 131.689 kb on - strand, within GFF3294 at 131.913 kb on + strand, within GFF3294 at 131.914 kb on - strand, within GFF3294 at 131.914 kb on - strand, within GFF3294 at 131.914 kb on - strand, within GFF3294 at 131.929 kb on - strand at 132.213 kb on + strand, within GFF3295 at 132.213 kb on + strand, within GFF3295 at 132.213 kb on + strand, within GFF3295 at 132.214 kb on - strand, within GFF3295 at 132.275 kb on + strand, within GFF3295 at 132.275 kb on + strand, within GFF3295 at 132.276 kb on - strand, within GFF3295 at 132.588 kb on + strand, within GFF3295 at 132.588 kb on + strand, within GFF3295 at 132.588 kb on + strand, within GFF3295 at 132.589 kb on - strand, within GFF3295 at 132.589 kb on - strand, within GFF3295 at 132.600 kb on + strand, within GFF3295 at 132.600 kb on + strand, within GFF3295 at 132.615 kb on + strand, within GFF3295 at 132.615 kb on + strand, within GFF3295 at 132.615 kb on + strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.715 kb on + strand, within GFF3295 at 132.945 kb on + strand, within GFF3295 at 132.945 kb on + strand, within GFF3295 at 132.945 kb on + strand, within GFF3295 at 132.946 kb on - strand, within GFF3295 at 132.946 kb on - strand, within GFF3295 at 132.946 kb on - strand, within GFF3295 at 132.963 kb on + strand, within GFF3295 at 132.964 kb on - strand, within GFF3295 at 133.041 kb on + strand, within GFF3295 at 133.041 kb on + strand, within GFF3295 at 133.042 kb on - strand, within GFF3295 at 133.267 kb on - strand, within GFF3295 at 133.448 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 131,126 - GFF3294 0.29 -0.9 131,262 + GFF3294 0.40 +0.4 131,286 + GFF3294 0.42 +0.6 131,516 + GFF3294 0.59 +0.8 131,516 + GFF3294 0.59 -0.4 131,516 + GFF3294 0.59 +1.0 131,516 + GFF3294 0.59 -0.0 131,517 - GFF3294 0.59 -0.0 131,610 + GFF3294 0.66 +0.9 131,610 + GFF3294 0.66 +0.3 131,610 + GFF3294 0.66 -0.1 131,610 + GFF3294 0.66 +0.3 131,611 - GFF3294 0.66 +0.0 131,611 - GFF3294 0.66 +1.0 131,688 + GFF3294 0.72 -0.4 131,688 + GFF3294 0.72 -0.3 131,688 + GFF3294 0.72 +1.4 131,688 + GFF3294 0.72 -1.9 131,689 - GFF3294 0.72 +0.1 131,689 - GFF3294 0.72 +1.3 131,913 + GFF3294 0.90 +0.1 131,914 - GFF3294 0.90 +0.7 131,914 - GFF3294 0.90 -0.8 131,914 - GFF3294 0.90 +0.6 131,929 - +1.0 132,213 + GFF3295 0.10 -0.7 132,213 + GFF3295 0.10 -0.7 132,213 + GFF3295 0.10 -0.5 132,214 - GFF3295 0.10 -2.2 132,275 + GFF3295 0.15 -0.9 132,275 + GFF3295 0.15 +0.3 132,276 - GFF3295 0.15 -0.4 132,588 + GFF3295 0.38 +0.2 132,588 + GFF3295 0.38 +0.1 132,588 + GFF3295 0.38 -0.4 132,589 - GFF3295 0.39 +1.0 132,589 - GFF3295 0.39 -1.0 132,600 + GFF3295 0.39 -1.6 132,600 + GFF3295 0.39 -0.6 132,615 + GFF3295 0.40 +2.2 132,615 + GFF3295 0.40 +0.2 132,615 + GFF3295 0.40 -1.5 132,616 - GFF3295 0.41 +1.3 132,616 - GFF3295 0.41 -1.6 132,616 - GFF3295 0.41 -0.2 132,616 - GFF3295 0.41 +0.2 132,715 + GFF3295 0.48 -0.8 132,945 + GFF3295 0.65 -0.3 132,945 + GFF3295 0.65 -0.0 132,945 + GFF3295 0.65 -0.5 132,946 - GFF3295 0.65 -0.9 132,946 - GFF3295 0.65 +1.1 132,946 - GFF3295 0.65 -0.0 132,963 + GFF3295 0.67 -0.3 132,964 - GFF3295 0.67 -0.4 133,041 + GFF3295 0.73 +0.3 133,041 + GFF3295 0.73 +0.1 133,042 - GFF3295 0.73 +0.2 133,267 - GFF3295 0.90 +0.1 133,448 - +1.4
Or see this region's nucleotide sequence