Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3293 and GFF3294 are separated by 107 nucleotides GFF3294 and GFF3295 are separated by 27 nucleotides
GFF3293 - Glycine--tRNA ligase beta subunit, at 128,436 to 130,634
GFF3293
GFF3294 - Proline/betaine transporter, at 130,742 to 132,049
GFF3294
GFF3295 - Proline/betaine transporter, at 132,077 to 133,405
GFF3295
Position (kb) 130
131
132
133 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.708 kb on - strand at 130.818 kb on + strand at 130.818 kb on + strand at 130.818 kb on + strand at 130.837 kb on + strand at 130.838 kb on - strand at 130.986 kb on + strand, within GFF3294 at 130.986 kb on + strand, within GFF3294 at 130.986 kb on + strand, within GFF3294 at 131.126 kb on - strand, within GFF3294 at 131.262 kb on + strand, within GFF3294 at 131.286 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.516 kb on + strand, within GFF3294 at 131.517 kb on - strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.610 kb on + strand, within GFF3294 at 131.611 kb on - strand, within GFF3294 at 131.611 kb on - strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.688 kb on + strand, within GFF3294 at 131.689 kb on - strand, within GFF3294 at 131.689 kb on - strand, within GFF3294 at 131.913 kb on + strand, within GFF3294 at 131.914 kb on - strand, within GFF3294 at 131.914 kb on - strand, within GFF3294 at 131.914 kb on - strand, within GFF3294 at 131.929 kb on - strand at 132.213 kb on + strand, within GFF3295 at 132.213 kb on + strand, within GFF3295 at 132.213 kb on + strand, within GFF3295 at 132.214 kb on - strand, within GFF3295 at 132.275 kb on + strand, within GFF3295 at 132.275 kb on + strand, within GFF3295 at 132.276 kb on - strand, within GFF3295 at 132.588 kb on + strand, within GFF3295 at 132.588 kb on + strand, within GFF3295 at 132.588 kb on + strand, within GFF3295 at 132.589 kb on - strand, within GFF3295 at 132.589 kb on - strand, within GFF3295 at 132.600 kb on + strand, within GFF3295 at 132.600 kb on + strand, within GFF3295 at 132.615 kb on + strand, within GFF3295 at 132.615 kb on + strand, within GFF3295 at 132.615 kb on + strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.616 kb on - strand, within GFF3295 at 132.715 kb on + strand, within GFF3295 at 132.945 kb on + strand, within GFF3295 at 132.945 kb on + strand, within GFF3295 at 132.945 kb on + strand, within GFF3295 at 132.946 kb on - strand, within GFF3295 at 132.946 kb on - strand, within GFF3295 at 132.946 kb on - strand, within GFF3295 at 132.963 kb on + strand, within GFF3295 at 132.964 kb on - strand, within GFF3295 at 133.041 kb on + strand, within GFF3295 at 133.041 kb on + strand, within GFF3295 at 133.042 kb on - strand, within GFF3295
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 130,708 - -0.9 130,818 + -0.2 130,818 + +1.0 130,818 + +0.9 130,837 + -0.1 130,838 - +0.3 130,986 + GFF3294 0.19 -0.9 130,986 + GFF3294 0.19 -0.0 130,986 + GFF3294 0.19 -0.4 131,126 - GFF3294 0.29 -0.9 131,262 + GFF3294 0.40 +0.4 131,286 + GFF3294 0.42 +0.6 131,516 + GFF3294 0.59 +0.8 131,516 + GFF3294 0.59 -0.4 131,516 + GFF3294 0.59 +1.0 131,516 + GFF3294 0.59 -0.0 131,517 - GFF3294 0.59 -0.0 131,610 + GFF3294 0.66 +0.9 131,610 + GFF3294 0.66 +0.3 131,610 + GFF3294 0.66 -0.1 131,610 + GFF3294 0.66 +0.3 131,611 - GFF3294 0.66 +0.0 131,611 - GFF3294 0.66 +1.0 131,688 + GFF3294 0.72 -0.4 131,688 + GFF3294 0.72 -0.3 131,688 + GFF3294 0.72 +1.4 131,688 + GFF3294 0.72 -1.9 131,689 - GFF3294 0.72 +0.1 131,689 - GFF3294 0.72 +1.3 131,913 + GFF3294 0.90 +0.1 131,914 - GFF3294 0.90 +0.7 131,914 - GFF3294 0.90 -0.8 131,914 - GFF3294 0.90 +0.6 131,929 - +1.0 132,213 + GFF3295 0.10 -0.7 132,213 + GFF3295 0.10 -0.7 132,213 + GFF3295 0.10 -0.5 132,214 - GFF3295 0.10 -2.2 132,275 + GFF3295 0.15 -0.9 132,275 + GFF3295 0.15 +0.3 132,276 - GFF3295 0.15 -0.4 132,588 + GFF3295 0.38 +0.2 132,588 + GFF3295 0.38 +0.1 132,588 + GFF3295 0.38 -0.4 132,589 - GFF3295 0.39 +1.0 132,589 - GFF3295 0.39 -1.0 132,600 + GFF3295 0.39 -1.6 132,600 + GFF3295 0.39 -0.6 132,615 + GFF3295 0.40 +2.2 132,615 + GFF3295 0.40 +0.2 132,615 + GFF3295 0.40 -1.5 132,616 - GFF3295 0.41 +1.3 132,616 - GFF3295 0.41 -1.6 132,616 - GFF3295 0.41 -0.2 132,616 - GFF3295 0.41 +0.2 132,715 + GFF3295 0.48 -0.8 132,945 + GFF3295 0.65 -0.3 132,945 + GFF3295 0.65 -0.0 132,945 + GFF3295 0.65 -0.5 132,946 - GFF3295 0.65 -0.9 132,946 - GFF3295 0.65 +1.1 132,946 - GFF3295 0.65 -0.0 132,963 + GFF3295 0.67 -0.3 132,964 - GFF3295 0.67 -0.4 133,041 + GFF3295 0.73 +0.3 133,041 + GFF3295 0.73 +0.1 133,042 - GFF3295 0.73 +0.2
Or see this region's nucleotide sequence