Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3216 and GFF3217 are separated by 27 nucleotides GFF3217 and GFF3218 are separated by 83 nucleotides
GFF3216 - hypothetical protein, at 41,705 to 43,099
GFF3216
GFF3217 - Cytochrome bd-I ubiquinol oxidase subunit 2, at 43,127 to 44,131
GFF3217
GFF3218 - Bacterial non-heme ferritin, at 44,215 to 44,706
GFF3218
Position (kb) 43
44
45 Strain fitness (log2 ratio) -2
-1
0
1
2 at 42.317 kb on + strand, within GFF3216 at 42.318 kb on - strand, within GFF3216 at 42.740 kb on - strand, within GFF3216 at 42.768 kb on - strand, within GFF3216 at 42.768 kb on - strand, within GFF3216 at 42.947 kb on + strand, within GFF3216 at 43.136 kb on + strand at 43.137 kb on - strand at 43.137 kb on - strand at 43.137 kb on - strand at 43.184 kb on + strand at 43.184 kb on + strand at 43.184 kb on + strand at 43.184 kb on + strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.185 kb on - strand at 43.352 kb on + strand, within GFF3217 at 43.353 kb on - strand, within GFF3217 at 43.353 kb on - strand, within GFF3217 at 43.377 kb on - strand, within GFF3217 at 43.856 kb on + strand, within GFF3217 at 43.856 kb on + strand, within GFF3217 at 43.857 kb on - strand, within GFF3217 at 43.857 kb on - strand, within GFF3217 at 43.964 kb on + strand, within GFF3217 at 43.965 kb on - strand, within GFF3217 at 44.069 kb on + strand at 44.084 kb on + strand at 44.085 kb on - strand at 44.124 kb on - strand at 44.175 kb on + strand at 44.252 kb on + strand at 44.252 kb on + strand at 44.252 kb on + strand at 44.252 kb on + strand at 44.253 kb on - strand at 44.636 kb on + strand, within GFF3218 at 44.636 kb on + strand, within GFF3218 at 44.636 kb on + strand, within GFF3218 at 44.637 kb on - strand, within GFF3218 at 44.637 kb on - strand, within GFF3218 at 44.962 kb on + strand at 44.962 kb on + strand at 44.963 kb on - strand at 44.963 kb on - strand at 45.095 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 42,317 + GFF3216 0.44 -0.5 42,318 - GFF3216 0.44 -0.6 42,740 - GFF3216 0.74 -1.3 42,768 - GFF3216 0.76 -1.1 42,768 - GFF3216 0.76 -0.1 42,947 + GFF3216 0.89 -0.2 43,136 + -0.6 43,137 - -0.3 43,137 - -1.3 43,137 - +0.4 43,184 + -0.7 43,184 + +1.0 43,184 + -1.0 43,184 + +0.1 43,185 - -2.1 43,185 - +0.2 43,185 - +0.1 43,185 - -0.0 43,185 - +0.9 43,185 - -0.3 43,185 - -0.7 43,185 - -1.4 43,185 - -1.7 43,352 + GFF3217 0.22 +1.3 43,353 - GFF3217 0.22 +0.6 43,353 - GFF3217 0.22 +1.5 43,377 - GFF3217 0.25 -1.1 43,856 + GFF3217 0.73 -0.6 43,856 + GFF3217 0.73 -0.2 43,857 - GFF3217 0.73 -0.5 43,857 - GFF3217 0.73 -0.2 43,964 + GFF3217 0.83 +0.0 43,965 - GFF3217 0.83 +2.3 44,069 + +0.1 44,084 + -0.7 44,085 - +1.4 44,124 - -0.7 44,175 + +0.8 44,252 + -0.0 44,252 + +1.1 44,252 + -0.1 44,252 + +0.1 44,253 - -0.7 44,636 + GFF3218 0.86 +0.1 44,636 + GFF3218 0.86 -0.5 44,636 + GFF3218 0.86 -1.2 44,637 - GFF3218 0.86 -2.1 44,637 - GFF3218 0.86 +0.3 44,962 + -1.1 44,962 + -0.1 44,963 - -0.0 44,963 - +1.7 45,095 - -0.1
Or see this region's nucleotide sequence