Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3183 and GFF3184 are separated by 13 nucleotides GFF3184 and GFF3185 are separated by 9 nucleotides GFF3185 and GFF3186 are separated by 18 nucleotides
GFF3183 - hypothetical protein, at 2,390 to 5,161
GFF3183
GFF3184 - 4-hydroxybenzoyl-CoA reductase subunit gamma, at 5,175 to 5,690
GFF3184
GFF3185 - hypothetical protein, at 5,700 to 6,314
GFF3185
GFF3186 - hypothetical protein, at 6,333 to 7,430
GFF3186
Position (kb) 5
6 Strain fitness (log2 ratio) -1
0
1
2 at 4.230 kb on - strand, within GFF3183 at 4.230 kb on - strand, within GFF3183 at 4.703 kb on + strand, within GFF3183 at 4.704 kb on - strand, within GFF3183 at 4.704 kb on - strand, within GFF3183 at 4.782 kb on + strand, within GFF3183 at 4.799 kb on + strand, within GFF3183 at 4.800 kb on - strand, within GFF3183 at 4.883 kb on + strand, within GFF3183 at 4.952 kb on + strand at 4.952 kb on + strand at 4.953 kb on - strand at 4.953 kb on - strand at 5.625 kb on + strand, within GFF3184 at 5.625 kb on + strand, within GFF3184 at 5.626 kb on - strand, within GFF3184 at 5.634 kb on + strand, within GFF3184 at 5.634 kb on + strand, within GFF3184 at 6.034 kb on - strand, within GFF3185 at 6.118 kb on + strand, within GFF3185 at 6.118 kb on + strand, within GFF3185 at 6.118 kb on + strand, within GFF3185 at 6.118 kb on + strand, within GFF3185 at 6.118 kb on + strand, within GFF3185 at 6.119 kb on - strand, within GFF3185 at 6.119 kb on - strand, within GFF3185 at 6.119 kb on - strand, within GFF3185 at 6.119 kb on - strand, within GFF3185 at 6.119 kb on - strand, within GFF3185 at 6.317 kb on + strand at 6.318 kb on - strand at 6.335 kb on + strand at 6.340 kb on - strand at 6.340 kb on - strand at 6.421 kb on - strand at 6.421 kb on - strand at 6.517 kb on - strand, within GFF3186 at 6.517 kb on - strand, within GFF3186 at 6.613 kb on - strand, within GFF3186 at 6.660 kb on + strand, within GFF3186
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 4,230 - GFF3183 0.66 -0.2 4,230 - GFF3183 0.66 -0.4 4,703 + GFF3183 0.83 -1.1 4,704 - GFF3183 0.83 -0.0 4,704 - GFF3183 0.83 -0.0 4,782 + GFF3183 0.86 +0.2 4,799 + GFF3183 0.87 -0.2 4,800 - GFF3183 0.87 -0.4 4,883 + GFF3183 0.90 -0.6 4,952 + +0.1 4,952 + +0.2 4,953 - +0.4 4,953 - +0.2 5,625 + GFF3184 0.87 -0.1 5,625 + GFF3184 0.87 +2.3 5,626 - GFF3184 0.87 +0.5 5,634 + GFF3184 0.89 +0.6 5,634 + GFF3184 0.89 -0.7 6,034 - GFF3185 0.54 +0.1 6,118 + GFF3185 0.68 +0.2 6,118 + GFF3185 0.68 -1.5 6,118 + GFF3185 0.68 +0.2 6,118 + GFF3185 0.68 -0.0 6,118 + GFF3185 0.68 +1.2 6,119 - GFF3185 0.68 -0.3 6,119 - GFF3185 0.68 +0.7 6,119 - GFF3185 0.68 -1.0 6,119 - GFF3185 0.68 -0.4 6,119 - GFF3185 0.68 -0.9 6,317 + +0.4 6,318 - +0.8 6,335 + -0.7 6,340 - -0.1 6,340 - -0.1 6,421 - -1.1 6,421 - +0.1 6,517 - GFF3186 0.17 +0.5 6,517 - GFF3186 0.17 +0.1 6,613 - GFF3186 0.26 +0.4 6,660 + GFF3186 0.30 -1.4
Or see this region's nucleotide sequence