Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3143 and GFF3144 are separated by 25 nucleotides GFF3144 and GFF3145 overlap by 4 nucleotides
GFF3143 - Glutathione hydrolase-like YwrD proenzyme, at 878,507 to 880,132
GFF3143
GFF3144 - N-(2-amino-2-carboxyethyl)-L-glutamate synthase, at 880,158 to 881,240
GFF3144
GFF3145 - Long-chain-fatty-acid--CoA ligase, at 881,237 to 882,763
GFF3145
Position (kb) 880
881
882 Strain fitness (log2 ratio) -2
-1
0
1
2 at 879.199 kb on - strand, within GFF3143 at 879.204 kb on + strand, within GFF3143 at 879.205 kb on - strand, within GFF3143 at 879.358 kb on + strand, within GFF3143 at 879.358 kb on + strand, within GFF3143 at 879.359 kb on - strand, within GFF3143 at 879.486 kb on + strand, within GFF3143 at 879.829 kb on - strand, within GFF3143 at 879.829 kb on - strand, within GFF3143 at 880.176 kb on + strand at 880.177 kb on - strand at 880.244 kb on - strand at 880.244 kb on - strand at 880.547 kb on - strand, within GFF3144 at 880.547 kb on - strand, within GFF3144 at 880.780 kb on + strand, within GFF3144 at 880.946 kb on - strand, within GFF3144 at 880.946 kb on - strand, within GFF3144 at 881.026 kb on + strand, within GFF3144 at 881.095 kb on + strand, within GFF3144 at 881.095 kb on + strand, within GFF3144 at 881.096 kb on - strand, within GFF3144 at 881.361 kb on + strand at 881.362 kb on - strand at 881.461 kb on + strand, within GFF3145 at 881.589 kb on + strand, within GFF3145 at 881.589 kb on + strand, within GFF3145 at 881.589 kb on + strand, within GFF3145 at 881.589 kb on + strand, within GFF3145 at 881.590 kb on - strand, within GFF3145 at 881.590 kb on - strand, within GFF3145 at 881.593 kb on - strand, within GFF3145 at 881.595 kb on - strand, within GFF3145 at 881.634 kb on + strand, within GFF3145 at 881.635 kb on - strand, within GFF3145 at 881.775 kb on + strand, within GFF3145 at 881.776 kb on - strand, within GFF3145 at 881.853 kb on + strand, within GFF3145 at 881.853 kb on + strand, within GFF3145 at 882.056 kb on - strand, within GFF3145 at 882.057 kb on + strand, within GFF3145 at 882.057 kb on + strand, within GFF3145 at 882.058 kb on - strand, within GFF3145 at 882.144 kb on + strand, within GFF3145
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 879,199 - GFF3143 0.43 +0.9 879,204 + GFF3143 0.43 +0.3 879,205 - GFF3143 0.43 -0.6 879,358 + GFF3143 0.52 +0.8 879,358 + GFF3143 0.52 +0.4 879,359 - GFF3143 0.52 -1.1 879,486 + GFF3143 0.60 -0.7 879,829 - GFF3143 0.81 -0.1 879,829 - GFF3143 0.81 -0.2 880,176 + +1.1 880,177 - -2.5 880,244 - +0.1 880,244 - +0.8 880,547 - GFF3144 0.36 +0.5 880,547 - GFF3144 0.36 -0.3 880,780 + GFF3144 0.57 +0.2 880,946 - GFF3144 0.73 +0.2 880,946 - GFF3144 0.73 -1.0 881,026 + GFF3144 0.80 +0.0 881,095 + GFF3144 0.87 -0.3 881,095 + GFF3144 0.87 +0.5 881,096 - GFF3144 0.87 +0.9 881,361 + -0.2 881,362 - +1.0 881,461 + GFF3145 0.15 -0.4 881,589 + GFF3145 0.23 -0.7 881,589 + GFF3145 0.23 +1.8 881,589 + GFF3145 0.23 -0.6 881,589 + GFF3145 0.23 +0.1 881,590 - GFF3145 0.23 -1.0 881,590 - GFF3145 0.23 -1.4 881,593 - GFF3145 0.23 -0.6 881,595 - GFF3145 0.23 -0.2 881,634 + GFF3145 0.26 +0.7 881,635 - GFF3145 0.26 +1.9 881,775 + GFF3145 0.35 -1.0 881,776 - GFF3145 0.35 -0.3 881,853 + GFF3145 0.40 -0.4 881,853 + GFF3145 0.40 -1.1 882,056 - GFF3145 0.54 +0.6 882,057 + GFF3145 0.54 +0.7 882,057 + GFF3145 0.54 +0.2 882,058 - GFF3145 0.54 -1.8 882,144 + GFF3145 0.59 -0.1
Or see this region's nucleotide sequence