Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF305 and GFF306 are separated by 151 nucleotides GFF306 and GFF307 are separated by 347 nucleotides GFF307 and GFF308 are separated by 490 nucleotides GFF308 and GFF309 are separated by 37 nucleotides
GFF305 - hypothetical protein, at 316,603 to 316,866
GFF305
GFF306 - hypothetical protein, at 317,018 to 317,329
GFF306
GFF307 - hypothetical protein, at 317,677 to 318,288
GFF307
GFF308 - hypothetical protein, at 318,779 to 319,078
GFF308
GFF309 - hypothetical protein, at 319,116 to 319,613
GFF309
Position (kb) 317
318
319 Strain fitness (log2 ratio) -1
0
1
2
3 at 316.688 kb on + strand, within GFF305 at 317.018 kb on - strand at 317.087 kb on + strand, within GFF306 at 317.194 kb on + strand, within GFF306 at 317.205 kb on + strand, within GFF306 at 317.206 kb on - strand, within GFF306 at 317.206 kb on - strand, within GFF306 at 317.206 kb on - strand, within GFF306 at 317.272 kb on - strand, within GFF306 at 317.276 kb on + strand, within GFF306 at 317.291 kb on + strand, within GFF306 at 317.291 kb on + strand, within GFF306 at 317.291 kb on + strand, within GFF306 at 317.292 kb on - strand, within GFF306 at 317.340 kb on + strand at 317.341 kb on - strand at 317.341 kb on - strand at 317.341 kb on - strand at 317.362 kb on - strand at 317.491 kb on - strand at 317.491 kb on - strand at 317.627 kb on - strand at 318.503 kb on - strand at 318.582 kb on - strand at 318.582 kb on - strand at 318.582 kb on - strand at 318.582 kb on - strand at 318.651 kb on - strand at 318.651 kb on - strand at 318.781 kb on - strand at 319.112 kb on + strand at 319.113 kb on - strand at 319.113 kb on - strand at 319.113 kb on - strand at 319.113 kb on - strand at 319.153 kb on - strand at 319.254 kb on + strand, within GFF309
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 316,688 + GFF305 0.32 -0.6 317,018 - -0.9 317,087 + GFF306 0.22 -0.3 317,194 + GFF306 0.56 -0.1 317,205 + GFF306 0.60 +0.3 317,206 - GFF306 0.60 +0.3 317,206 - GFF306 0.60 +0.6 317,206 - GFF306 0.60 +0.3 317,272 - GFF306 0.81 +0.8 317,276 + GFF306 0.83 -0.4 317,291 + GFF306 0.88 +0.4 317,291 + GFF306 0.88 -0.5 317,291 + GFF306 0.88 +1.1 317,292 - GFF306 0.88 +1.5 317,340 + -0.2 317,341 - +0.4 317,341 - +0.1 317,341 - +0.6 317,362 - +2.3 317,491 - +0.2 317,491 - -1.2 317,627 - +0.5 318,503 - +0.4 318,582 - -0.2 318,582 - -1.3 318,582 - -1.1 318,582 - -0.6 318,651 - -0.5 318,651 - -1.2 318,781 - -0.0 319,112 + -1.3 319,113 - -1.3 319,113 - -0.5 319,113 - +0.6 319,113 - +0.6 319,153 - +0.6 319,254 + GFF309 0.28 +3.3
Or see this region's nucleotide sequence