Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF302 and GFF303 are separated by 3 nucleotides GFF303 and GFF304 are separated by 1 nucleotides GFF304 and GFF305 overlap by 8 nucleotides GFF305 and GFF306 are separated by 151 nucleotides GFF306 and GFF307 are separated by 347 nucleotides
GFF302 - hypothetical protein, at 315,491 to 316,069
GFF302
GFF303 - hypothetical protein, at 316,073 to 316,333
GFF303
GFF304 - hypothetical protein, at 316,335 to 316,610
GFF304
GFF305 - hypothetical protein, at 316,603 to 316,866
GFF305
GFF306 - hypothetical protein, at 317,018 to 317,329
GFF306
GFF307 - hypothetical protein, at 317,677 to 318,288
GFF307
Position (kb) 317
318 Strain fitness (log2 ratio) -1
0
1
2 at 316.018 kb on - strand at 316.260 kb on + strand, within GFF303 at 316.495 kb on + strand, within GFF304 at 316.495 kb on + strand, within GFF304 at 316.688 kb on + strand, within GFF305 at 317.018 kb on - strand at 317.087 kb on + strand, within GFF306 at 317.194 kb on + strand, within GFF306 at 317.205 kb on + strand, within GFF306 at 317.206 kb on - strand, within GFF306 at 317.206 kb on - strand, within GFF306 at 317.206 kb on - strand, within GFF306 at 317.272 kb on - strand, within GFF306 at 317.276 kb on + strand, within GFF306 at 317.291 kb on + strand, within GFF306 at 317.291 kb on + strand, within GFF306 at 317.291 kb on + strand, within GFF306 at 317.292 kb on - strand, within GFF306 at 317.340 kb on + strand at 317.341 kb on - strand at 317.341 kb on - strand at 317.341 kb on - strand at 317.362 kb on - strand at 317.491 kb on - strand at 317.491 kb on - strand at 317.627 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 316,018 - -0.1 316,260 + GFF303 0.72 -0.6 316,495 + GFF304 0.58 -0.4 316,495 + GFF304 0.58 +0.6 316,688 + GFF305 0.32 -0.6 317,018 - -0.9 317,087 + GFF306 0.22 -0.3 317,194 + GFF306 0.56 -0.1 317,205 + GFF306 0.60 +0.3 317,206 - GFF306 0.60 +0.3 317,206 - GFF306 0.60 +0.6 317,206 - GFF306 0.60 +0.3 317,272 - GFF306 0.81 +0.8 317,276 + GFF306 0.83 -0.4 317,291 + GFF306 0.88 +0.4 317,291 + GFF306 0.88 -0.5 317,291 + GFF306 0.88 +1.1 317,292 - GFF306 0.88 +1.5 317,340 + -0.2 317,341 - +0.4 317,341 - +0.1 317,341 - +0.6 317,362 - +2.3 317,491 - +0.2 317,491 - -1.2 317,627 - +0.5
Or see this region's nucleotide sequence