Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2998 and GFF2999 are separated by 443 nucleotides GFF2999 and GFF3000 are separated by 70 nucleotides GFF3000 and GFF3001 are separated by 145 nucleotides
GFF2998 - hypothetical protein, at 725,891 to 727,009
GFF2998
GFF2999 - Undecaprenyl-diphosphatase, at 727,453 to 728,325
GFF2999
GFF3000 - hypothetical protein, at 728,396 to 728,998
GFF3000
GFF3001 - putative MFS-type transporter, at 729,144 to 730,469
GFF3001
Position (kb) 727
728
729 Strain fitness (log2 ratio) -1
0
1 at 726.687 kb on + strand, within GFF2998 at 726.688 kb on - strand, within GFF2998 at 726.699 kb on + strand, within GFF2998 at 726.700 kb on - strand, within GFF2998 at 727.179 kb on + strand at 727.180 kb on - strand at 727.366 kb on + strand at 727.367 kb on - strand at 727.367 kb on - strand at 728.262 kb on - strand at 728.262 kb on - strand at 728.262 kb on - strand at 728.267 kb on - strand at 728.471 kb on + strand, within GFF3000 at 728.471 kb on + strand, within GFF3000 at 728.471 kb on + strand, within GFF3000 at 728.713 kb on + strand, within GFF3000 at 728.713 kb on + strand, within GFF3000 at 728.713 kb on + strand, within GFF3000 at 728.713 kb on + strand, within GFF3000 at 728.714 kb on - strand, within GFF3000 at 728.714 kb on - strand, within GFF3000 at 728.714 kb on - strand, within GFF3000 at 729.285 kb on + strand, within GFF3001 at 729.297 kb on + strand, within GFF3001 at 729.297 kb on + strand, within GFF3001 at 729.297 kb on + strand, within GFF3001 at 729.298 kb on - strand, within GFF3001 at 729.298 kb on - strand, within GFF3001
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 726,687 + GFF2998 0.71 -0.7 726,688 - GFF2998 0.71 -0.3 726,699 + GFF2998 0.72 -0.5 726,700 - GFF2998 0.72 +1.6 727,179 + +0.5 727,180 - -1.0 727,366 + -0.0 727,367 - +0.1 727,367 - +0.4 728,262 - -0.0 728,262 - +0.1 728,262 - -0.5 728,267 - +0.3 728,471 + GFF3000 0.12 -0.3 728,471 + GFF3000 0.12 +0.6 728,471 + GFF3000 0.12 -0.0 728,713 + GFF3000 0.53 -1.4 728,713 + GFF3000 0.53 +1.0 728,713 + GFF3000 0.53 -0.1 728,713 + GFF3000 0.53 -1.2 728,714 - GFF3000 0.53 -0.3 728,714 - GFF3000 0.53 +1.5 728,714 - GFF3000 0.53 -0.5 729,285 + GFF3001 0.11 +0.3 729,297 + GFF3001 0.12 +0.2 729,297 + GFF3001 0.12 -0.9 729,297 + GFF3001 0.12 +0.8 729,298 - GFF3001 0.12 +0.2 729,298 - GFF3001 0.12 +0.9
Or see this region's nucleotide sequence