Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2996 and GFF2997 are separated by 39 nucleotides GFF2997 and GFF2998 overlap by 4 nucleotides GFF2998 and GFF2999 are separated by 443 nucleotides
GFF2996 - hypothetical protein, at 723,840 to 724,922
GFF2996
GFF2997 - Modulator of FtsH protease HflC, at 724,962 to 725,894
GFF2997
GFF2998 - hypothetical protein, at 725,891 to 727,009
GFF2998
GFF2999 - Undecaprenyl-diphosphatase, at 727,453 to 728,325
GFF2999
Position (kb) 725
726
727
728 Strain fitness (log2 ratio) -2
-1
0
1
2 at 725.146 kb on + strand, within GFF2997 at 725.146 kb on + strand, within GFF2997 at 725.167 kb on + strand, within GFF2997 at 725.168 kb on - strand, within GFF2997 at 725.168 kb on - strand, within GFF2997 at 725.356 kb on + strand, within GFF2997 at 725.356 kb on + strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.629 kb on + strand, within GFF2997 at 725.629 kb on + strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.713 kb on + strand, within GFF2997 at 725.713 kb on + strand, within GFF2997 at 725.747 kb on - strand, within GFF2997 at 725.980 kb on - strand at 726.063 kb on + strand, within GFF2998 at 726.166 kb on - strand, within GFF2998 at 726.166 kb on - strand, within GFF2998 at 726.231 kb on + strand, within GFF2998 at 726.231 kb on + strand, within GFF2998 at 726.231 kb on + strand, within GFF2998 at 726.364 kb on - strand, within GFF2998 at 726.364 kb on - strand, within GFF2998 at 726.364 kb on - strand, within GFF2998 at 726.364 kb on - strand, within GFF2998 at 726.687 kb on + strand, within GFF2998 at 726.688 kb on - strand, within GFF2998 at 726.699 kb on + strand, within GFF2998 at 726.700 kb on - strand, within GFF2998 at 727.179 kb on + strand at 727.180 kb on - strand at 727.366 kb on + strand at 727.367 kb on - strand at 727.367 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 725,146 + GFF2997 0.20 +0.0 725,146 + GFF2997 0.20 +0.0 725,167 + GFF2997 0.22 +0.4 725,168 - GFF2997 0.22 +0.0 725,168 - GFF2997 0.22 -0.8 725,356 + GFF2997 0.42 +0.4 725,356 + GFF2997 0.42 -0.1 725,357 - GFF2997 0.42 -0.6 725,357 - GFF2997 0.42 -0.4 725,357 - GFF2997 0.42 +1.1 725,357 - GFF2997 0.42 -0.0 725,357 - GFF2997 0.42 +0.0 725,357 - GFF2997 0.42 -0.2 725,629 + GFF2997 0.71 +0.6 725,629 + GFF2997 0.71 -0.3 725,630 - GFF2997 0.72 +2.4 725,630 - GFF2997 0.72 +0.6 725,630 - GFF2997 0.72 +0.3 725,630 - GFF2997 0.72 +0.4 725,630 - GFF2997 0.72 -0.4 725,630 - GFF2997 0.72 +0.0 725,713 + GFF2997 0.80 +0.7 725,713 + GFF2997 0.80 +1.2 725,747 - GFF2997 0.84 -0.4 725,980 - -0.8 726,063 + GFF2998 0.15 +0.7 726,166 - GFF2998 0.25 +1.1 726,166 - GFF2998 0.25 -1.8 726,231 + GFF2998 0.30 -0.8 726,231 + GFF2998 0.30 -0.3 726,231 + GFF2998 0.30 +0.9 726,364 - GFF2998 0.42 +0.4 726,364 - GFF2998 0.42 +0.8 726,364 - GFF2998 0.42 +0.4 726,364 - GFF2998 0.42 +0.5 726,687 + GFF2998 0.71 -0.7 726,688 - GFF2998 0.71 -0.3 726,699 + GFF2998 0.72 -0.5 726,700 - GFF2998 0.72 +1.6 727,179 + +0.5 727,180 - -1.0 727,366 + -0.0 727,367 - +0.1 727,367 - +0.4
Or see this region's nucleotide sequence