Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2992 and GFF2993 are separated by 56 nucleotides GFF2993 and GFF2994 overlap by 1 nucleotides GFF2994 and GFF2995 overlap by 4 nucleotides GFF2995 and GFF2996 are separated by 23 nucleotides
GFF2992 - Vitamin B12 transporter BtuB, at 719,170 to 721,143
GFF2992
GFF2993 - hypothetical protein, at 721,200 to 722,078
GFF2993
GFF2994 - Hemin transport system permease protein HmuU, at 722,078 to 723,064
GFF2994
GFF2995 - Hemin import ATP-binding protein HmuV, at 723,061 to 723,816
GFF2995
GFF2996 - hypothetical protein, at 723,840 to 724,922
GFF2996
Position (kb) 722
723
724 Strain fitness (log2 ratio) -1
0
1 at 721.470 kb on + strand, within GFF2993 at 721.470 kb on + strand, within GFF2993 at 721.557 kb on + strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.613 kb on - strand, within GFF2993 at 722.384 kb on + strand, within GFF2994 at 722.385 kb on - strand, within GFF2994 at 722.385 kb on - strand, within GFF2994 at 722.579 kb on + strand, within GFF2994 at 722.579 kb on + strand, within GFF2994 at 723.241 kb on + strand, within GFF2995 at 723.242 kb on - strand, within GFF2995 at 723.453 kb on + strand, within GFF2995 at 723.454 kb on - strand, within GFF2995 at 723.814 kb on + strand at 723.829 kb on - strand at 723.917 kb on - strand at 723.917 kb on - strand at 723.938 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 721,470 + GFF2993 0.31 -0.5 721,470 + GFF2993 0.31 -0.4 721,557 + GFF2993 0.41 -0.4 721,558 - GFF2993 0.41 +1.0 721,558 - GFF2993 0.41 -0.5 721,558 - GFF2993 0.41 +0.3 721,558 - GFF2993 0.41 +0.8 721,613 - GFF2993 0.47 +0.7 722,384 + GFF2994 0.31 -0.4 722,385 - GFF2994 0.31 -0.0 722,385 - GFF2994 0.31 +0.1 722,579 + GFF2994 0.51 -1.4 722,579 + GFF2994 0.51 -0.9 723,241 + GFF2995 0.24 +1.4 723,242 - GFF2995 0.24 -1.2 723,453 + GFF2995 0.52 +1.1 723,454 - GFF2995 0.52 +1.1 723,814 + +0.4 723,829 - -1.0 723,917 - -1.1 723,917 - -0.6 723,938 - +0.2
Or see this region's nucleotide sequence